Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 127 3e-23 seq482 107 3e-17 seq115 91.5 2e-12 >seq2 Length=850095 Score = 127 bits (140), Expect = 3e-23 Identities = 93/108 (86%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 ||||| || |||||||| |||||| |||| |||||| | || ||||||||||| |||||| Sbjct 425261 GCCGCAAATTACCTCGATATCAAGGCCCTTCTCGATGTCGGTTGCAAGACCGTTGCCAAC 425320 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATC 2035754 | |||||||||||||| || ||||| |||||||||||||| |||||| Sbjct 425321 ATGATCAAGGGCAAGTCCCCAGAGGAGATCCGCAAGACCTTCAACATC 425368 >seq482 Length=325002 Score = 107 bits (118), Expect = 3e-17 Identities = 141/194 (73%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || || ||||| ||| | |||||| ||| | |||||||||||| ||||||||| Sbjct 233313 CCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAAGCCGGGCATGAGACCGCGCTTC 233372 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| |||| || ||| |||||||||||||||||||||||| Sbjct 233373 TTGAGCCAGAAGATGGATGCGAAAGCACCGCTGAAGAAGATGCCCTCGACGGCGGCAAAG 233432 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAG-GCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 ||||||| ||| || || || || | || | | |||||||||| ||||| Sbjct 233433 GCGACGAGACGCGACGCGAAGGT----AGAGTTGTCATCGCAAATCCACTTCAATGCCCA 233488 Query 794520 CTCTGCCTTTTTCC 794533 || ||||| |||| Sbjct 233489 GTCGGCCTTCTTCC 233502 >seq115 Length=330173 Score = 91.5 bits (100), Expect = 2e-12 Identities = 128/177 (72%), Gaps = 2/177 (1%) Strand=Plus/Minus Query 2071819 GGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCGCATAAACAGGTCGCACGT 2071877 ||||| | |||| ||| |||||| | || | || || ||| || |||||| | Sbjct 101800 GGGCACATCAGCGTCCACTCGCCGTTCTGTT-CGACTCGCTTCATGAATAGGTCGGGAAT 101742 Query 2071878 CCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAG 2071937 ||||| | | || || |||||||| || || ||| || ||||||||||||||| |||| Sbjct 101741 CCACAAGGCATAGAAAAGATCGCGAGCACGTGCCTCTTCTTTGCCGTGGTTCTTTCTCAG 101682 Query 2071938 GTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCC 2071994 || | ||||| || || || |||||||| ||||| ||||| |||||| || || Sbjct 101681 ATCCAACCAGTTGATGACATCTGCGTGCCATGGCTCGAGGTAAATGGCAAATGCACC 101625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916176511913423