Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq52 105 4e-18 seq519 84.2 1e-11 >seq52 Length=836814 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| || ||| |||| | || || ||||||||||| |||||| Sbjct 426689 TCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCGAAG 426630 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || ||||| || ||||| | || | ||||| ||||| | ||||| |||||| Sbjct 426629 ATAAGTCGCTGTTGGTCCGGTGGAATACCCTCTTTGTCCTGGATTTTGGTCTTGACGTTG 426570 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || || || || || | || |||||||| ||||| | ||||| || Sbjct 426569 TCGATGGTGTCTGAGGATTCAACCTCCAATGTGATGGTCTTACCCGTCAACGTCTTGACG 426510 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 426509 AAGATCTGCAT 426499 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||| |||||||| ||||| | | || | || |||||||||||||| ||||| Sbjct 426918 CTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAA 426859 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||| || || ||||||||| | || | || |||||||| | || ||| |||||| Sbjct 426858 GATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTTGTCTTGACGTT 426799 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| || | ||||| || | || |||||||| || ||||| ||||| || Sbjct 426798 GTCGATCGTATCGGATGATTCGACTTCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCAC 426739 Query 34966 AAAGATCTGCAT 34977 || |||||||| Sbjct 426738 GAAAATCTGCAT 426727 >seq519 Length=112231 Score = 84.2 bits (92), Expect = 1e-11 Identities = 131/185 (71%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847 |||| |||||||| ||||| | | | || |||| ||||| |||||||||||||||| Sbjct 63195 CCTTTTGAATGTTGTAGTCACTCAAGGTACGTCCATCCTCCAGCTGCTTTCCGGCGAAGA 63254 Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907 |||| || || |||||| | || | || || || || | || || ||||| || Sbjct 63255 TCAGCCGCTGTTGGTCTGGTGGGATTCCTTCTTTATCCTGGATCTTAGTCTTGAC--AT- 63311 Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963 | ||||| ||| | ||||| |||| || ||||||||||| |||||||| || Sbjct 63312 -TGTCGATTGTGTCAGACGATTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGGGTTTTG 63370 Query 34964 ACAAA 34968 || || Sbjct 63371 ACGAA 63375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690192116683