Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq52 125 5e-23 seq525 95.1 9e-14 >seq52 Length=836814 Score = 125 bits (138), Expect = 5e-23 Identities = 419/641 (65%), Gaps = 12/641 (2%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| || || ||||||||||||||||| | ||| | || | || | | ||| Sbjct 455591 ACGAGACGGTTGTCGAAATCTTCACCTCCCAAGTGAGTGTCACCAGCAGTGGACTTGACT 455532 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | || | || ||||||| | ||| |||| ||||| |||||| ||||| | ||| Sbjct 455531 TCAAAGATACCCTCTTCAATGGTCAACAGAGACACATCGAAGGTTCCTCCACCAAGATCG 455472 Query 282302 AAAATAAGTACATTCATTTCTTTGTC-TTGG--TTTTTATCAAGACCATACGCAAAAGCA 282358 || || || ||||| ||| | | ||| || || || ||||| || |||| ||| Sbjct 455471 AAGATTAGAACATTGCGTTC---GCCAGTGGCCTTCTTGTCGAGACCGTAGGCAATTGCA 455415 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 || || || || || || || || | || ||||| || || |||||| || || ||| Sbjct 455414 GCGGCTGTGGGCTCGTTGATGATACGCAGGACATTGAGGCCTGCAATTAGACCGGCGTCT 455355 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || || ||||||| || || ||||| || ||||| || || || | ||||||| |||| Sbjct 455354 TTGGTAGCTTGTCGCTGAGAGTCGTTGAAGTATGCTGGGACTGTGACGACGGCAT-TGTT 455296 Query 282479 -ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGA 282537 || ||||| ||| | ||||| | | ||| || | |||||||| || || Sbjct 455295 GACGGTACCTCCAAGATATGACTCGGCTGTCTCTCGCATCTTGGTCAAAATCATGGAGGA 455236 Query 282538 AATTTGTTCTGGAGAATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTT 282596 |||| ||||| | | ||||| || |||| | | || | || | || | Sbjct 455235 GATTTCCTCTGGTGTGAAAGTCTTGGTCTCGCCCTTGAATTCAATCTGGACAACA-GGCT 455177 Query 282597 TATTACCAACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG- 282655 | ||| | || || || || || | | |||||||| | |||||| || || Sbjct 455176 TGCCACCCTTGTCGATGACCTTGAAAGGGAAGTGCTTCATATCAGCTTGAAC-CTCAGGA 455118 Query 282656 TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACT 282715 || ||| | | || || | || || ||||| || | || ||| || || | Sbjct 455117 TCCGCAAACTTGCGGCCGATGAGGCGCTTGGCATCGAAGACTGTGTTGACGGGGTTCATG 455058 Query 282716 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATAT 282775 || |||| | || || | || ||||| ||| | || || || || || | |||| | Sbjct 455057 GCGACTTGGTTCTTCGCCGAGTCACCAATGAGACGCTCCGTGTCGGTGAAGGCAACAAAC 454998 Query 282776 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTC 282816 || || ||||| || ||||| || ||||| || || ||||| Sbjct 454997 GACGGTGTTGTTCGGTTACCCTGGTCATTGGCGATGATTTC 454957 >seq525 Length=1454817 Score = 95.1 bits (104), Expect = 9e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347 ||||| ||||||||| | ||||| |||||||||||||| |||||||| | || || || Sbjct 688238 GGTAAGGAAGGTCGTCTCAGAGGCAATTTGATGGGAAAACGTGTCGACTTCTCCGCCCGA 688297 Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCC 432397 || || |||||| |||||| || | ||||| ||||||| ||||| || Sbjct 688298 ACCGTCATTACTGGTGATCCGAACTTGTCTCTCGATGAAGTCGGTGTGCC 688347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740598144076482