Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq482 113 6e-19 >seq482 Length=325002 Score = 113 bits (124), Expect = 6e-19 Identities = 119/153 (78%), Gaps = 3/153 (2%) Strand=Plus/Minus Query 1456121 GGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGA 1456180 |||| |||||||||||||| |||||||||| | | || | || || ||| || Sbjct 233502 GGAAGAAGGCCGACTGGGCATTGAAGTGGATTTGCGATGACAAC-TCTAC-CTTCGCGTC 233445 Query 1456181 GCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239 ||| ||||||| ||||||||| |||||||||||||| ||| || |||| |||| Sbjct 233444 GCGTCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCATCCAT 233385 Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 ||| ||||||||||||||||| ||||||||||| Sbjct 233384 CTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGG 233352 Score = 98.7 bits (108), Expect = 1e-14 Identities = 189/274 (69%), Gaps = 5/274 (2%) Strand=Plus/Minus Query 1455785 ATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGA 1455844 |||||| || |||||| |||||| || ||||| ||||| ||| |||| ||| | || Sbjct 233891 ATGTAC-AAGAAGGCCATGGCCTCGTTCTGGACTGCCGAAGAGATCGATCTCTCCAAAGA 233833 Query 1455845 CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCT 1455901 | ||||| ||| | | ||| ||||| ||| |||||| ||| | || Sbjct 233832 TGTGCCAGACTGGAACAACCGCCTCAACGATGACGAACGCTTCTTCATCTCCCACATTCT 233773 Query 1455902 CGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGA 1455961 ||| || || ||| || |||||||| || |||||| || | || || | | Sbjct 233772 CGCATTCTT-CGCAGCATCGGATGGCATTGTCAACGAGAATCTCCTTGAGCGATTCAGCA 233714 Query 1455962 AAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACA 1456021 | |||||||| | ||||| || || | || ||||| ||||||||||| || || |||| Sbjct 233713 ATGAGGTCCAGGTTCCAGAAGCTCGATGCTTCTACGGTTTCCAGATCGCTATGGAGAACA 233654 Query 1456022 TCCACTCTGAAACCTACTCGCTCCTGATCGACAC 1456055 | ||||| || || ||||| |||||||| || || Sbjct 233653 TTCACTCCGAGACATACTCCCTCCTGATTGAGAC 233620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177747831142434