Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq115 107 3e-18 >seq115 Length=330173 Score = 107 bits (118), Expect = 3e-18 Identities = 448/697 (64%), Gaps = 14/697 (2%) Strand=Plus/Minus Query 69546 TCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCAT 69605 |||||| ||||| | || ||||||| | |||| | | | | | ||||| ||||| Sbjct 101816 TCCAGGGCATTCGTGAGGGCACATCAGCGTCCACTCGCCGTTCTGTTCGACTCGCTTCAT 101757 Query 69606 AAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTC 69664 ||||| ||||||||||| | || ||| || ||||| | | | ||||| || | Sbjct 101756 GAATAGGTCGGGAATCCACA-AGGCATAGAAAAGATCGCGAGCACGTGCCTCTTCTTTGC 101698 Query 69665 CTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 69724 | || ||| | ||||| | | | || | ||| | |||||||| || || || | Sbjct 101697 CGTGGTTCTTTCTCAGATCCAACCAGTTGATGACATCTGCGTGCCATGGCTCGAGGTAAA 101638 Query 69725 TCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTAT 69784 | || | | || || || || ||||| || ||||| | ||| | ||||| | Sbjct 101637 TGGCAAATGCACCAGGACGCTTGTTTCCACCTTGATCGACGTAGCGAGCAGTCGCGTCGA 101578 Query 69785 AGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTC 69844 |||| | ||||| |||| || || || ||| | || |||||||| ||| || || Sbjct 101577 AGACACGGAGCATGGGAACAAGCCCGTTTGATGTGCCGTTTGTTCCTCCAATGTATGATC 101518 Query 69845 CTCTTGCGCGAATA--TTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAG 69902 | | || | ||| | | || | ||||| || || || || | || || || | Sbjct 101517 CGGTGGCTCTGATACGGTGCACATTG--AGACCAATACCGCCAGCGGTCTTCGAAATCAT 101460 Query 69903 AGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAG 69962 |||||| || | ||||| || |||||||| ||||| || ||| | ||| || | Sbjct 101459 CGCACAAGTCTTAAGGGTGTCGTAAATACCCTCAATGCTGTCCTCTTT--TGTATCGATG 101402 Query 69963 AAAACAGCTAGAC---ATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGC 70019 | | ||| |||| | || | || || || |||||||| | || || || || Sbjct 101401 AGGA-AGCAAGACGAGAGCTGTGGTTGAGGTGTGCCTGCATTAAAAAGCGTGGGCGAGGC 101343 Query 70020 GTGAGTGAACCATTT-TTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCC 70078 ||| || || |||| ||| | | || |||||||| | ||||| | || |||||| Sbjct 101342 GTGTGTAAAGTATTTGTTCGACATGTAG-TTGTATGTCTGGATAGCAGCCTCAATATCCT 101284 Query 70079 ACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTAT 70138 | ||||| || | || || ||||| | |||||| || || || || | || Sbjct 101283 CCCCGTGAATCCCAACAGCTACGCGCATGATCATATGTTGTGGACGCTCAGCGACCTTGC 101224 Query 70139 TATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAA 70198 |||| | |||||| ||| || || ||||| || ||||| || | ||| | Sbjct 101223 CGCTTATCCGGAGCAGGTACGATCGCTCGAGCGTTTTGAAACCAAAGTATTGGTAATTGA 101164 Query 70199 AGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATC 70235 ||||||| ||||| | |||| | || || || | ||| Sbjct 101163 AGTCTCTGTCGTAGACAATAGCGGAGTTCAGCTCATC 101127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686903158761480