Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq115 100 4e-16 >seq115 Length=330173 Score = 100 bits (110), Expect = 4e-16 Identities = 684/1081 (63%), Gaps = 34/1081 (3%) Strand=Plus/Minus Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413 ||| ||| ||||||||||||||| |||||||| | || ||||| | | ||| Sbjct 103026 GCCATTGTTCGGAGATAGTACATGCCGGTCTTCAAACCCATCTTCCAACCAGCGAAGTGC 102967 Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGG 110473 || || | || |||| ||| || || || |||| || ||||| || ||| ||| Sbjct 102966 ATGGACGTGATCTTGCCCATGGTGGGCTCTTTCATGTGGATGTTCAAGCTCTGAGATTGA 102907 Query 110474 TCAATGAAGCGCCCC-CGTTGTGCCGCCATATCAATGACATCCTTCATCTTA---ATTTC 110529 ||||| || ||| || || | || ||||| |||| | | | || | || || Sbjct 102906 TCAATAAA-CGCACCGCGGTCGGCGGCCATGGTTATGA--TGGTACG-CTGACTGATCTC 102851 Query 110530 CCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGA 110589 ||| || || || || ||||| ||||| ||||| | | ||||| |||||||| Sbjct 102850 CCAGACGGTCTTGTACAGGGCTTTGATGTCATCAGGGATGTTGGGTATATTTTGGATGGA 102791 Query 110590 ACCCCCCGCCTTCACCA----TGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCT 110645 || || |||| || || ||| |||||| | | ||||||||||| |||| Sbjct 102790 GCCACC----TTCAGCAATGATGCGATTCTTCATGTTGTCAGACCAGAGACCCATCTCGA 102735 Query 110646 TGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCA 110705 ||| || |||| || ||| || | ||||| || || || || | Sbjct 102734 CGAGATCCTTGAGTAGCCATGGGTTAACGACCTGGAACTCTCCAGCAAGCACTCGACGAG 102675 Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765 ||||||||| | |||||||| || ||||| ||||| ||| | || || | |||| Sbjct 102674 AGTAGATGTTCGACGTGTATGGCTCGAAGCACTCATTGAAACCGAGAATCTGAGATGTGG 102615 Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825 | || || ||||| || || | | ||| || || | ||| | | |||||| Sbjct 102614 AAGCAGTCGGCATAGGAGCAACAAGAAGCGAATTGCGGACACCGTGCCTCTTGATATCAG 102555 Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGAGC--TTGGTTTCACCTTCCCACATGTCAAACTG 110883 ||||||| |||||||| || || | | ||| | || |||| ||||||| |||| Sbjct 102554 CCTTGAGCGAGTCCCAGTCCCAGA-GATCAGTGGGTGTGACGTTCC-ACATGTCGTACTG 102497 Query 110884 AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 || | |||||||| |||| || || || ||| | || | ||| | ||| || Sbjct 102496 GAGAATGCCTTGGGAAACGGGTGAGCCTTCGTAGGACTTGTATGTACCCTCCTCTTGCGC 102437 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 | | ||| || ||| | |||||||| || || || ||||| || || | Sbjct 102436 GAGCTTGCAGGACGAGGTCAGAGCGGCGTGATAGATTGTCTCGAAGATTTGAATGTTGAG 102377 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAG-CGGCACAAAATAAATACATCCGCGAGAC 111062 || || |||||| || || || | |||| ||| | || || |||| || |||| Sbjct 102376 CTTTTTTGCTTCAGGAGACTCGAAGG-GTAGACGGAGCGCAAGGAAAGCATCAGCAAGAC 102318 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGC--GCAGTCTCAAC 111120 | || ||||| | ||| | || | || || | | | | || | | || ||| Sbjct 102317 CCTGCACACCGACACCGACTGGACGATGACG-AGAGTTG-CTGTTGTATGCTTCAGGAAC 102260 Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 ||| || || ||||||| ||| | |||| | || ||| || ||| Sbjct 102259 GGGGTAGTGGTTGACATCAATGATCTTGTTCAAATTTCGGACGACCGTCTGAACGACTTC 102200 Query 111181 ATG-AAGTTTTTCATAATCAAAAGTGC-GAGT--CTCTTCATTGACATACTTTGGAAGGG 111236 || || || || | ||||| | || | || | | ||| || | | || | | Sbjct 102199 GTGCAACTTGTTGA-AATCATAGACGCCGCGTTGCACGTCAACGA---AGGTCGGCAACG 102144 Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296 | || |||||||| ||||| ||||| |||||| | | ||| || | || || | Sbjct 102143 CCATGGATGCCAAGTTGCACACAGCGACCTCATCTGGCGCAGAGTATTCGATGATCTCAG 102084 Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356 | || |||||||| || || || ||||| ||||| ||||||||||| ||||| | Sbjct 102083 TGCACAAGTTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTTACTCTTGCGATTGCAAG 102024 Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416 |||| || || ||||| | || | || ||||| ||||| | || ||||| || | || Sbjct 102023 CATCTTTATAAAGCATAAAAGGGTTGCCGGTCTCGGTCTGGGCTTGTAGAATGGCGTACC 101964 Query 111417 A 111417 | Sbjct 101963 A 101963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628026842287200