Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq115 140 4e-28 seq482 98.7 1e-15 >seq115 Length=330173 Score = 140 bits (154), Expect = 4e-28 Identities = 695/1087 (64%), Gaps = 40/1087 (4%) Strand=Plus/Minus Query 117827 GGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATG 117886 |||| ||| |||||| |||||||| || ||||| | ||| |||||| || | || Sbjct 103027 GGCCATTGTTCGGAGATAGTACATGCCGGTCTTCAAACCCATCTTCCAACCAGCGAAGTG 102968 Query 117887 CATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 117946 ||| || | | |||| | ||| || || |||| || ||||| || || ||||| Sbjct 102967 CATGGACGTGATCTTGCCCATGGTGGGCTCTTTCATGTGGATGTTCAAGCTCTGAGATTG 102908 Query 117947 ATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCT---TGATTTC 118003 ||| || || || || || || ||||| || | | | | || |||| || Sbjct 102907 ATCAATAAACGCACCGCGGTCGGCGGCCATGGTTATGA--TGGTACG-CTGACTGATCTC 102851 Query 118004 CCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 118063 ||| || ||| |||| ||| || || ||||| ||||| | |||||||||||||| Sbjct 102850 CCAGACGGTCTTGTACAGGGCTTTGATGTCATCAGGGATGTTGGGTATATTTTGGATGGA 102791 Query 118064 TCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAG 118123 ||||| | | ||| ||| |||||| | | ||||||||||| |||| ||| Sbjct 102790 GCCACCTTCAGCAATGATGCGATTCTTCATGTTGTCAGACCAGAGACCCATCTCGACGAG 102731 Query 118124 ATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA 118181 ||||| | || ||| | | || || ||||| || || || || | ||| Sbjct 102730 ATCCTTGAGTAGCCATGGGT--TAACGACCTGGAACTCTCCAGCAAGCACTCGACG-AGA 102674 Query 118182 -TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240 ||||| || | |||||||||||| |||||||||||| ||| | || || | |||||| Sbjct 102673 GTAGATGTTCGACGTGTATGGCTCGAAGCACTCATTGAAACCGAGAATCTGAGATGTGGA 102614 Query 118241 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTC 118300 || || ||||| || || | ||||| || |||| ||| | | | || | Sbjct 102613 AGCAGTCGGCATAGGAGCAACAAGAAGCGAATTGCGGACACCGTGCCTCTTGATATCAGC 102554 Query 118301 CTTGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATATCAAACTGGA 118359 |||||| | ||||||||| || || | || | | | |||||| || |||||| Sbjct 102553 CTTGAGCGAGTCCCAGTCCCAGA-GATCAGTGGGTGTGACGTTCCACATGTCGTACTGGA 102495 Query 118360 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 118419 | || |||||||| | || || || || | | || |||| ||||| | | ||| | Sbjct 102494 GAATGCCTTGGGAAACGGGTGAGCCTTCGTAGGACTTGTATGTACCCTCCTCTTGCGCGA 102435 Query 118420 ATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTG 118479 | | || || || || |||||||| ||||| || || || || || | Sbjct 102434 GCTTGCAGGACGAGGTCAGAGCGGCGTGATAGATTGTCTCGAAGATTTGAATGTTGAGCT 102375 Query 118480 CCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTT 118539 || || || || || || | || ||| | || || |||| || ||||| | Sbjct 102374 TTTTTGCTTCAGGAGACTCGAAGGGTAGACGGAGCGCAAGGAAAGCATCAGCAAGACCCT 102315 Query 118540 GGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC------- 118592 | ||||||| || | ||| ||||| | ||| || | | || | | Sbjct 102314 GCACACCGACACCGACTGGACGATGACG------AGAGTTGCT-GTTGTATGCTTCAGGA 102262 Query 118593 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652 ||||| || || ||| || | | | || | |||| | ||| || || | Sbjct 102261 ACGGGGTAGTGGTTGACATCAATGATCTTGTTCAAATTTCGGACGACCGTCTGAACGACT 102202 Query 118653 TCATGAAGCTTTTCGTAATCAAA-ACTGCGAGT--CTCTTCATTGACATACTTAGGAAGG 118709 || || | ||| | | ||||| | || || || | | ||| || | | || | Sbjct 102201 TCGTGCAACTTGTTGAAATCATAGACGCCGCGTTGCACGTCAACGA---AGGTCGGCAAC 102145 Query 118710 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 118769 || || || |||| || ||||||| | |||||| ||| ||| || || || || Sbjct 102144 GCCATGGATGCCAAGTTGCACACAGCGACCTCATCTGGCGCAGAGTATTCGATGATCTCA 102085 Query 118770 GTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACT-TTGTG-TTAC 118827 ||||||||||| || || ||||| ||||||||||| || || ||| ||| | || | Sbjct 102084 GTGCACAAGTTGGAGCTGCGGATGGTTCCCAAGTTCTTCTGGTT--ACTCTTGCGATTGC 102027 Query 118828 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG-AGAATAGCC 118886 | ||||| || |||||||| | || | || ||||| || |||| |||| ||||| || Sbjct 102026 AAGCATCTTTATAAAGCATAAAAGGGTTGCCGGTCTCGGTCTGGG-CTTGTAGAATGGCG 101968 Query 118887 TTCCAGA 118893 | ||||| Sbjct 101967 TACCAGA 101961 Score = 86.0 bits (94), Expect = 8e-12 Identities = 341/534 (64%), Gaps = 11/534 (2%) Strand=Plus/Minus Query 119031 TCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGA 119090 || || ||||||||||| ||||| || ||||| | || |||| ||||| ||| || Sbjct 101770 TCGACTCGCTTCATGAATAGGTCGGGAATCCACAAGGCATAGAAAAGATCGCGAGCACGT 101711 Query 119091 GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCAC 119150 || ||||| | || || || | || ||||| ||| |||| ||| |||||||| Sbjct 101710 GCCTCTTCTTTGCCGTGGTTCTTTCTCAGATCCAACCAGTTGATGACATCTGCGTGCCAT 101651 Query 119151 GGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATAC 119204 || || ||||| | || | || || | |||| ||| | || | || || Sbjct 101650 GGCTCGAGGTAAATGGCAAATGCACC---AGGACGCTTGTTTCCACCTTGATCGACGTAG 101594 Query 119205 CTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTC 119264 | ||||| |||| || ||||| ||||| |||| | || | ||| ||| ||||| Sbjct 101593 CGAGCAGTCGCGTCGAAGACACGGAGCATGGGAACAAGCCCGTTTGATGTGCCGTTTGTT 101534 Query 119265 CCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCC 119324 || | ||| || ||||||||| | ||| | | | ||||||||| || || Sbjct 101533 CCTCCAATGTATGATCCGGTGGCTCTGATACGGTGCACATTGAGACCAATACCGCCAGCG 101474 Query 119325 CACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCC 119384 ||| || || ||| || | | || || |||| || || || || ||| | Sbjct 101473 GTCTTCGAAATCATCGCACAAGTCTTAAGGGTGTCGTAAATACCCTCAATGCTGTCCTCT 101414 Query 119385 TTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGA 119444 || | ||||||||||||| ||| | || || ||||| || || || || || Sbjct 101413 TTTGTATCGATGAGGAAGCAAGACGAGAGCTGTGGTTGAGGTGTGCCTGCATTAAAAAGC 101354 Query 119445 GTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCAAGACGGC 119503 || || | ||||| | || || | | ||||| | || ||| |||| | | || Sbjct 101353 GTGGGCGAGGCGTGTGT-AAAGTATTTGTTCGACATGTAGTTGTATGTCTGGATAGCAGC 101295 Query 119504 GGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 119557 ||| || ||||||||||| || | | || ||||| | ||| | ||| || Sbjct 101294 CTCAATATCCTCCCCGTGAATCCCAACAGCTACGCGCATGATCATATGTTGTGG 101241 >seq482 Length=325002 Score = 98.7 bits (108), Expect = 1e-15 Identities = 339/518 (65%), Gaps = 18/518 (3%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || |||||||||||||| || ||||| ||| | | | ||||||||||| Sbjct 233007 TAGTCACCCACACGCTTCTCGAAGAAATTCGTCTTTCCGGCGAGGGAAATATTCTCCATG 233066 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGGCACT-CCAATCTGTTTGAGGAGACG 129846 || ||||| ||||| | || ||| || || | |||| | || ||||| Sbjct 233067 AAGTCAAAAGGGTTGACAGCATTGTAAACCT-TGACATTGCCAAGCGCGAGCAGTAGACG 233125 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | || |||||||||| | |||| | |||||||| |||| || | || Sbjct 233126 ATCAGCAACAAACTCAATGTATTGGCACATAAGTCCCGAGTTCATGCCGAGCAGTCTGCA 233185 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||| || || || | |||| ||| ||| || | || || || | ||| ||| | Sbjct 233186 TGGTAGAGCCTCGCTCAAGAACTCCTGCTCGATTTGTACTGCCTCAGTAATGATAGCGCG 233245 Query 129967 AATGGTCTCCGTGCCAGG--TCTA-TTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 | || || | ||| ||| ||| || | | ||| || ||| || || Sbjct 233246 GACGGCTTCAGGCGAAGGCTTCTTGTTGAGCTGTGAGAAAAGGAGG--CA-GGCGAAATC 233302 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| | ||||| || ||||||||||| || || |||||| || || |||||||| Sbjct 233303 GGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAAGCCGGGCATGAG 233362 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||||| | |||||| || | || | || ||||||||| ||||| || Sbjct 233363 ACCGCGCTTCTTGAGCCAGAAGATGGATGCGAAAGCACCGCTGAAGAAGATGCCCTCGAC 233422 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGG-AGCGGGACTTTGT-ATC---AAACCAC 130198 || || || | ||||||| || |||| || | |||| ||| || |||| Sbjct 233423 GGCGGCAAAGGCGACGAGACGCGACGCGAAGGTAGAG-----TTGTCATCGCAAATCCAC 233477 Query 130199 TTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 |||| ||||| | ||||| ||| ||| || ||||| Sbjct 233478 TTCAATGCCCAGTCGGCCTTCTTCCGGATGCAAGGGAC 233515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618430121100920