Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq52 201 3e-46 seq519 122 3e-22 seq525 98.7 3e-15 seq430 91.5 4e-13 >seq52 Length=836814 Score = 201 bits (222), Expect = 3e-46 Identities = 496/743 (67%), Gaps = 16/743 (2%) Strand=Plus/Plus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 ||||| || |||||||| ||||| || || || || || | | | | | | | || || Sbjct 454894 GCTATCGGTATCGATTTGGGTACCACGTACTCATGCGTGGGTATCTTCCGAGACGACCGC 454953 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 | ||||| || || ||||| || |||||| ||||||| || || | ||||| || ||| Sbjct 454954 ATCGAAATCATCGCCAATGACCAGGGTAACCGAACAACACCGTCGTTTGTTGCCTTCACC 455013 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || |||||| | |||||||| || || || || |||| || || || || Sbjct 455014 GACACGGAGCGTCTCATTGGTGACTCGGCGAAGAACCAAGTCGCCATGAACCCCGTCAAC 455073 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAAT 349436 || || || ||||| ||||| || || || | | ||| | || | | | || | Sbjct 455074 ACAGTCTTCGATGCCAAGCGCCTCATCGGCCGCAAGTTTGCGGATCCTGAGGTTCA--AG 455131 Query 349437 CTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTG 349496 ||||| | || || || ||||| | || | | | ||| |||| || || || | Sbjct 455132 CTGATATGAAGCACTTCCCTTTCAAGGTCAT-CGACAAG--GGTGGCAAGCCTGTTGTCC 455188 Query 349497 AGGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 || |||||| || || || || || || || ||| || ||||| || || ||| || Sbjct 455189 AGATTGAATTCAAGGGCGAGACCAAGACT-TTCACACCAGAGGAAATCTCCTCCATGATT 455247 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 || || ||| || | || || ||||| | || | || || | |||| || Sbjct 455248 TTGACCAAGATGCGAGAGACAGCCGAGTCATATCTTGGAGGTACCGTCAACAATGCCGTC 455307 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 | || || ||||| || || || || | ||||| || || ||||| || || Sbjct 455308 GTCACAGTCCCAGCATACTTCAACGACTCTCAGCGACAAGCTACCAAAGACGCCGGTCTA 455367 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||||| || | ||||| || | || || || || ||||| || || |||||||| || Sbjct 455368 ATTGCAGGCCTCAATGTCCTGCGTATCATCAACGAGCCCACAGCCGCTGCAATTGCCTAC 455427 Query 349736 GGGCTTGATAAAATG---AGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792 || || || || | | | || | ||| ||| |||| || || ||| | ||||| Sbjct 455428 GGTCTCGACAAGAAGGCCACTGGC---GAACGCAATGTTCTAATCTTCGATCTTGGTGGA 455484 Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852 || || || ||||| || || | || |||||||||| || |||||||| || | ||| Sbjct 455485 GGAACCTTCGATGTGTCTCTGTTGACCATTGAAGAGGGTATCTTTGAAGTCAAGTCCACT 455544 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTT 349912 |||||||| || || | || || |||||||| || || |||||||| || ||||| Sbjct 455545 GCTGGTGACACTCACTTGGGAGGTGAAGATTTCGACAACCGTCTCGTCAACCACTTTGTG 455604 Query 349913 AAAGAATTTAAGCGTCAAGCTAA 349935 || || || ||||| |||| ||| Sbjct 455605 AACGAGTTCAAGCG-CAAGGTAA 455626 Score = 143 bits (158), Expect = 8e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 140541 GTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCA 140600 || ||||| |||||||| || || || || || || || ||||| ||||| ||||| Sbjct 426923 GTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAGTTGCTTTCCT 426864 Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT 140660 || ||||| || || ||||| || || || |||||||| || |||||||| || | || Sbjct 426863 GCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTTGTCTTG 426804 Query 140661 ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTT 140720 || || || |||| ||| |||| ||| ||||| ||||||| ||||| ||||| || || Sbjct 426803 ACGTTGTCGATCGTATCGGATGATTCGACTTCGAGTGTAATGGTCTTGCCGGTGAGAGTC 426744 Query 140721 TTTACAAAAATCTGCAT 140737 || || ||||||||||| Sbjct 426743 TTCACGAAAATCTGCAT 426727 Score = 98.7 bits (108), Expect = 3e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || ||||| || || |||||||| || || ||||| || || Sbjct 426501 CATACCACCACGGAGACGGAGGACAAGGTGGAGTGTAGACTCCTTCTGGATATTGTAGTC 426442 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || || || || ||||| || || ||||| || |||||||| | ||| || || || || Sbjct 426441 GGACAAGGTACGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAAACGCTGTTGGTCTGG 426382 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG-TT 140685 || || || || || || || || || | || || || || || | || | ||| | Sbjct 426381 TGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTC-GCTGGACT 426323 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTG 140718 |||| || || || | ||||| || |||| || Sbjct 426322 CAACCTCGAGGGTGATGGTCTTGCCAGTTACTG 426290 >seq519 Length=112231 Score = 122 bits (134), Expect = 3e-22 Identities = 135/180 (75%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609 |||||||| || || ||| || || || ||||| || || || ||||| || ||||| Sbjct 63197 TTTTGAATGTTGTAGTCACTCAAGGTACGTCCATCCTCCAGCTGCTTTCCGGCGAAGATC 63256 Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669 || || || || || || || ||||||||||||||||| || |||| || ||||| || Sbjct 63257 AGCCGCTGTTGGTCTGGTGGGATTCCTTCTTTATCCTGGATCTTAGTCTTGACATTGTCG 63316 Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729 || | ||||| | ||| || ||||| || | ||||||||||| || ||||| || ||| Sbjct 63317 ATTGTGTCAGACGATTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGGGTTTTGACGAAA 63376 >seq525 Length=1454817 Score = 98.7 bits (108), Expect = 3e-15 Identities = 108/143 (76%), Gaps = 3/143 (2%) Strand=Plus/Minus Query 377443 AATATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCA 377502 || ||||| | | ||| || |||||| | || || ||| || || | ||||||||| Sbjct 690576 AAGATTTCCTTGAGGCGAGGAACACCAAGCGTCACGTTC---TTCGAGGACACACCAGCA 690520 Query 377503 AAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATA 377562 || |||||||| || || || | || |||| ||| || ||||| ||||| ||||||| | Sbjct 690519 AAATGGAAAGTGTTCAGCGTCATCTGCGTAGCGGGTTCGCCAATGGACTGTGCTGCAAGA 690460 Query 377563 ACGCCAACCATTTCTCCAGGATT 377585 || |||||||| || |||||||| Sbjct 690459 ACACCAACCATATCACCAGGATT 690437 Score = 86.0 bits (94), Expect = 2e-11 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 266973 ATCGGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACGATTATTCCT 267032 ||||| || || ||| || ||| |||||||| |||||||||||||||| | | || Sbjct 429398 ATCGGAGACAAGTTTGCTTCTCGTCACGGACAGAAAGGTACCATTGGTATCACTTATCAA 429339 Query 267033 GAAGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCTCAT 267092 || || | ||||| || | || || | | ||| ||| ||||||| || ||||| Sbjct 429338 CAACAAGACATGCCTTTCTCGGCTGAAGGTCTAACACCAGATCTTATTATCAACCCTCAC 429279 Query 267093 GCTATTCCTAGTCGTATGACAATTGGTCAATT 267124 || ||||| |||||||||||||| ||| || Sbjct 429278 GCCATTCCCTCTCGTATGACAATTGCTCACTT 429247 >seq430 Length=527729 Score = 91.5 bits (100), Expect = 4e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | || || || || ||||| || ||||| ||||| || || || || Sbjct 369497 CATACCACCACGGAGTCGGAGGACGAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTC 369438 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 |||| ||||| || || || || || || || || ||||| | || ||||| || || Sbjct 369437 GGATAGGGTTCGTCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGG 369378 Query 140627 AGGAATTCCTTCTTTATC 140644 ||||||||||| || || Sbjct 369377 GGGAATTCCTTCCTTGTC 369360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515241644872571