Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq115 154 2e-32 seq482 95.1 1e-14 >seq115 Length=330173 Score = 154 bits (170), Expect = 2e-32 Identities = 359/539 (67%), Gaps = 2/539 (0%) Strand=Plus/Plus Query 19167 AGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACG 19226 |||||||| || ||| | || | ||| || ||||| |||| || ||||| || | Sbjct 101305 AGACATACAACTACATGTCGAACAAATACTTTACACACGCCTCGCCCACGCTTTTTAATG 101364 Query 19227 CCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCA 19286 | || || | || ||| | ||| || ||||| | | || || || ||||||| Sbjct 101365 CAGGCACACCTCAACCACAGCTCTCGTCTTGCTTCCTCATCGATACAAAAGAGGACAGCA 101424 Query 19287 TTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTA 19346 ||||||| || ||||| || || ||| || ||| || || ||| | || |||| Sbjct 101425 TTGAGGGTATTTACGACACCCTTAAGACTTGTGCGATGATTTCGAAGACCGCTGGCGGTA 101484 Query 19347 TCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGGA 19405 | || || | ||| | |||| | | | || || || || || ||||| Sbjct 101485 TTGGTCTCAATGTGCACCG-TATCAGAGCCACCGGATCATACATTGGAGGAACAAACGGC 101543 Query 19406 GTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAAC 19465 | | |||| | || || |||||||| |||||| || || || | |||||| | Sbjct 101544 ACATCAAACGGGCTTGTTCCCATGCTCCGTGTCTTCGACGCGACTGCTCGCTACGTCGAT 101603 Query 19466 CAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGAC 19525 || || || ||| || || | || ||||| |||||||||||||||||||| || Sbjct 101604 CAAGGTGGAAACAAGCGTCCTGGTGCATTTGCCATTTACCTCGAGCCATGGCACGCAGAT 101663 Query 19526 GTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCGAC 19585 ||||| | | | || ||| | |||||| || | || ||| || |||||| Sbjct 101664 GTCATCAACTGGTTGGATCTGAGAAAGAACCACGGCAAAGAAGAGGCACGTGCTCGCGAT 101723 Query 19586 CTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAGAA 19645 || ||| |||||||||||||| |||||||||||| || || || || ||| || Sbjct 101724 CTTTTCTATGCCTTGTGGATTCCCGACCTATTCATGAAGCGAGTCGAACAGAACGGCGAG 101783 Query 19646 TGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGTT 19704 ||| ||||||||||| |||||||||||||| || ||||| | || ||||| | ||| Sbjct 101784 TGGACGCTGATGTGCCCTCACGAATGCCCTGGACTCGCCGACATTTATGGCGACGAGTT 101842 Score = 129 bits (142), Expect = 6e-25 Identities = 679/1070 (63%), Gaps = 33/1070 (3%) Strand=Plus/Minus Query 78189 TGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACT 78248 |||||| | |||||||||||| ||||| | |||| ||||||| || | |||||| Sbjct 103021 TGTTCGGAGATAGTACATGCCGGTCTTCAAACCCATCTTCCAACCAGCGAAGTGCATGGA 102962 Query 78249 CGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 || | |||| ||| | || | | |||| |||||| | ||| || || || || Sbjct 102961 CGTGATCTTGCCCATGGTGGGCTCTTTCATGTGGATGTTCAAGCTCTGAGATTGATCAAT 102902 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTCGATGACCG-ACTTTTGCGGAATCTCCCAGATGG 78367 |||||||||||||||| |||||| |||| | || | | | |||||||||| || Sbjct 102901 AAACGCACCGCGGTCGGCGGCCATGGTTATGATGGTACGCTGACTG-ATCTCCCAGACGG 102843 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGT---CCAGCGCTTGTACGCTCCCACCGG 78424 || ||| | ||| || | || || |||||| | ||| | | ||||| Sbjct 102842 TCTTGTACAGGGCTTTGATGTCATCAGGGATGTTGGGTATATTTTGGATGGAGCCACCTT 102783 Query 78425 CTCGCACAATTTCATTCTTAAT-TTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGG 78483 | | || |||||| || ||| | |||| || |||| |||||| | Sbjct 102782 CAGCAATGATGCGATTCTTCATGTTGTCAG-ACCAGAGACCCATCTCGACGAGATCCTTG 102724 Query 78484 ACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTG 78543 | || |||||| | |||||| || || || || || ||||||||| Sbjct 102723 AGTAGCCATGGGTTAACGACCTGGAACTCTCCAGCAAGCACTCGACGAGAGTAGATGTTC 102664 Query 78544 GTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGC 78603 | |||||| |||||||| ||| ||| || | ||||| | || || || |||||| Sbjct 102663 GACGTGTATGGCTCGAAGCACTCATTGAAACCGAGAATCTGAGATGTGGAAGCAGTCGGC 102604 Query 78604 ATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAG---- 78659 || || || || || || ||||| || | ||| ||| ||||||| || |||| || Sbjct 102603 ATAGGAGCAACAAGAAGCGAATTGCGGACACCGTGCCTCTTGATATCAGCCTTGAGCGAG 102544 Query 78660 --GCCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCG 78717 | |||||| | ||| | | | || ||||||||| || || || || | | Sbjct 102543 TCCCAGTCCCAGAGATCAGTGGGTGTGACGTTCCACATGTCGTACTGGAGAATGCCTTGG 102484 Query 78718 GACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGAC 78777 || | || || || | | | | || ||| | |||||||| | ||||| | ||| ||| Sbjct 102483 GAAACGGGTGAGCCTTCGTAGGACTTGTATGTACCCTCCTCTTGCGCGAGCTTGCAGGAC 102424 Query 78778 TCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTG 78837 | ||| || ||||| || | | ||||||||| ||||||||| || | Sbjct 102423 GAGGTCAGAGCGGCGTGATAGATTGTCTCGAAGATTTGAATGTTGAGCTTTTTTGCTTCA 102364 Query 78838 GTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATA 78897 | ||||| | || | |||| | ||| |||| || || ||||| || |||| | Sbjct 102363 GGAGACTCGAAGGGTAGACGGAGCGCAAGGAAAGCATCAGCAAGACCCTGCACACCGACA 102304 Query 78898 GCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGG---TCGGGTAAAAGTTC 78954 ||| || || || || |||||| || | || || | ||||| ||| Sbjct 102303 CCGACTGGACGATGACGAGAGTTGCTGTT---GTATGCTTCAGGAACGGGGTAGTGGTTG 102247 Query 78955 CGATCGATGACGCGGTTCAGGTTACGCGTGACGAC---CCGAGTCACCTCGTACAATTTG 79011 ||| |||| ||||| || || |||||| | || || |||| ||| ||| Sbjct 102246 ACATCAATGATCTTGTTCAAATTTCG---GACGACCGTCTGAACGACTTCGTGCAACTTG 102190 Query 79012 GCGAAATCA-AAATG----ATTTC-CTTTGATGAAAGTCGGTAGGCACAGCGATGCCAGG 79065 ||||||| | | | || | | | | ||| ||||| | || ||||||| | Sbjct 102189 TTGAAATCATAGACGCCGCGTTGCACGTCAACGAAGGTCGGCAACGCCATGGATGCCAAG 102130 Query 79066 TTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGAC 79125 |||||||| || ||| || || ||| |||||||| || |||||||| || || Sbjct 102129 TTGCACACAGCGACCTCATCTGGCGCAGAGTATTCGATGATCTCAGTGCACAAGTTGGAG 102070 Query 79126 GACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCAC 79185 |||||| || | |||||||||||| ||||| || || || || || || | Sbjct 102069 CTGCGGATGGTTCCCAAGTTCTTCTGGTTACTCTTGCGATTGCAAGCATCTTTATAAAGC 102010 Query 79186 ATGTACGGCGTCCCGGTCTCAACCTGACTCTTG-AGAACGCCGTCCCAGA 79234 || | || | |||||||| ||| |||| |||| | ||| ||||| Sbjct 102009 ATAAAAGGGTTGCCGGTCTCGGTCTG-GGCTTGTAGAATGGCGTACCAGA 101961 Score = 120 bits (132), Expect = 3e-22 Identities = 198/286 (69%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 79306 TCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCG 79365 || ||||| | |||| || || ||||| ||||| ||||||||||| ||| || || Sbjct 101836 TCGCCATAAATGTCGGCGAGTCCAGGGCATTCGTGAGGGCACATCAGCGTCCACTCGCCG 101777 Query 79366 TCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGG 79425 | || || || || |||||| ||||| || ||||||| ||| ||| || ||||| Sbjct 101776 TTCTGTTCGACTCGCTTCATGAATAGGTCGGGAATCCACAAGGCATAGAAAAGATCGCGA 101717 Query 79426 CAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCG 79485 ||| ||| || | ||| |||||| | ||| || | ||| |||| || ||| Sbjct 101716 GCACGTGCCTCTTCTTTGCCGTGGTTCTTTCTCAGATCCAACCAGTTGATGACATCTGCG 101657 Query 79486 TGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACG 79545 ||||| ||||| || || ||||| || | ||| |||||| || || || | |||| Sbjct 101656 TGCCATGGCTCGAGGTAAATGGCAAATGCACCAGGACGCTTGTTTCCACCTTGATCGACG 101597 Query 79546 TACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGT 79591 || || || || || ||| || ||||||||||| || | |||| Sbjct 101596 TAGCGAGCAGTCGCGTCGAAGACACGGAGCATGGGAACAAGCCCGT 101551 >seq482 Length=325002 Score = 95.1 bits (104), Expect = 1e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 59982 CGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATT 60041 |||||| | || ||||| ||| || || ||||||||| || | ||| | || Sbjct 233443 CGTCTCGTCGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTGCTTTCGCATCCATC 233384 Query 60042 TTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCC 60101 ||||||||||| ||||| || |||||||| ||| ||| |||||||||||||| || ||| Sbjct 233383 TTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAGCTCATCTCC 233324 Query 60102 CGGGACGAGGGC 60113 || || |||||| Sbjct 233323 CGCGATGAGGGC 233312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548520295240080