Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq115 102 9e-17 >seq115 Length=330173 Score = 102 bits (112), Expect = 9e-17 Identities = 337/518 (65%), Gaps = 6/518 (1%) Strand=Plus/Plus Query 53244 AGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACG 53303 |||| ||| ||| ||| | || |||||||| |||||| |||| || || || || | Sbjct 101305 AGACATACAACTACATGTCGAACAAATACTTTACACACGCCTCGCCCACGCTTTTTAATG 101364 Query 53304 CTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGA 53363 | || || ||| || ||| | ||| |||||||| | | | || || ||| | Sbjct 101365 CAGGCACACCTCAACCACAGCTCTCGTCTTGCTTCCTCATCGATACAAAAGAGGACAGCA 101424 Query 53364 TCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTA 53423 | || || || ||||| || || ||| ||||| || || ||| | || |||| Sbjct 101425 TTGAGGGTATTTACGACACCCTTAAGACTTGTGCGATGATTTCGAAGACCGCTGGCGGTA 101484 Query 53424 TCGGTATCCAC-TGCTC-GAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG 53481 | ||| || | ||| | | | || | || | ||| || || || || ||||| Sbjct 101485 TTGGTCTCAATGTGCACCGTA--TCAGAGCCACCGGATCATACATTGGAGGAACAAACGG 101542 Query 53482 CGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAA 53541 | | | || | || || |||||||| |||||| || || || || |||||| | Sbjct 101543 CACATCAAACGGGCTTGTTCCCATGCTCCGTGTCTTCGACGCGACTGCTCGCTACGTCGA 101602 Query 53542 CCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGA 53601 || ||||| ||||| || | || ||||| ||||||||||| |||||||| || Sbjct 101603 TCAAGGTGGAAACAAGCGTCCTGGTGCATTTGCCATTTACCTCGAGCCATGGCACGCAGA 101662 Query 53602 CATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTG 53660 | || | | | || ||| | ||| || || | |||||| || ||| || | Sbjct 101663 TGTCATCAACTGGTTGGATCTGAGAAAGAACCACGGCAAAGAAGAGGCACG-TGCTCGCG 101721 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 | || || || |||||||||| ||||| |||||| | || || || ||| | Sbjct 101722 ATCTTTTCTATGCCTTGTGGATTCCCGACCTATTCATGAAGCGAGTCGAACAGAACGGCG 101781 Query 53721 AGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTC 53758 ||||| ||||||||||| |||| ||||| || ||| Sbjct 101782 AGTGGACGCTGATGTGCCCTCACGAATGCCCTGGACTC 101819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547211505988600