Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq52 167 3e-36 seq519 111 2e-19 seq430 111 2e-19 >seq52 Length=836814 Score = 167 bits (184), Expect = 3e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||| | || || ||||| || || | |||||||| || Sbjct 426499 ATGCAGATCTTCGTCAAGACGTTGACGGGTAAGACCATCACATTGGAGGTTGAATCCTCA 426558 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||| | ||||| |||||||| ||||| ||||| || ||||| Sbjct 426559 GACACCATCGACAACGTCAAGACCAAAATCCAGGACAAAGAGGGTATTCCACCGGACCAA 426618 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| |||||||||||||| | || ||||| | ||||| || Sbjct 426619 CAGCGACTTATCTTCGCTGGAAAGCAACTCGAGGACGGCCGCACCCTGTCCGACTACAAC 426678 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| |||||||| ||||| || | ||||| |||||||||||||| Sbjct 426679 ATCCAGAAGGAATCAACTCTGCACTTGGTCTTACGTCTTCGCGGTGG 426725 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 || |||||||| || || || ||||||||||| | || | ||| | || | ||| | Sbjct 426295 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGACC 426354 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || || ||||||||||| || || |||||||| |||||| | || ||||| || || Sbjct 426355 AAGATCCAAGACAAGGAGGGCATCCCACCAGACCAACAGCGTTTGATCTTTGCGGGCAAA 426414 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 || || ||||||| |||||| | | ||||| ||| |||| ||||| || || || || Sbjct 426415 CAGCTGGAGGATGGCCGTACCTTGTCCGACTACAATATCCAGAAGGAGTCTACACTCCAC 426474 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||||| || ||||| Sbjct 426475 CTTGTCCTCCGTCTCCGTGGTGG 426497 Score = 125 bits (138), Expect = 8e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| || ||||||||||| ||||| || || || || ||| Sbjct 426727 ATGCAGATTTTCGTGAAGACTCTCACCGGCAAGACCATTACACTCGAAGTCGAATCATCC 426786 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | || | ||| | || |||||||||||||| ||||| || ||||||||| Sbjct 426787 GATACGATCGACAACGTCAAGACAAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAG 426846 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 ||||| || || || || || |||||||| || || | ||||| | ||| ||||| || Sbjct 426847 CAGCGCCTCATCTTCGCAGGAAAGCAACTGGAAGACGGACGTACGTTGAGC-GACTACAA 426905 Query 27585 TGTCCAAAAGGAATCCAC 27602 | |||||||| || || Sbjct 426906 CATTCAAAAGGAGTCGAC 426923 >seq519 Length=112231 Score = 111 bits (122), Expect = 2e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || ||||| || || ||||| ||||| || ||||||||||| || || ||| | || Sbjct 63375 TTCGTCAAAACCCTCACCGGAAAGACCATCACTCTTGAGGTCGAATCGTCTGACACAATC 63316 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| |||| || ||||| || || ||||| || |||||||| ||||| || Sbjct 63315 GACAATGTCAAGACTAAGATCCAGGATAAAGAAGGAATCCCACCAGACCAACAGCGGCTG 63256 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || || || ||||| || ||||||| |||||| | ||||| || | |||||| Sbjct 63255 ATCTTCGCCGGAAAGCAGCTGGAGGATGGACGTACCTTGAGTGACTACAACATTCAAAAG 63196 Query 27595 G 27595 | Sbjct 63195 G 63195 >seq430 Length=527729 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| |||||||| |||||||||||||| | || || || || ||||| |||||| Sbjct 369360 GACAAGGAAGGAATTCCCCCAGACCAGCAGCGCTTGATCTTCGCAGGCAAGCAGCTCGAG 369419 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || |||||| | ||||| || |||||||||| || || ||||| || ||| | Sbjct 369420 GACGGACGAACCCTATCCGACTACAACATCCAAAAGGAGTCGACACTTCACCTCGTCCTC 369479 Query 27619 CGTCTTCGCGGTGG 27632 || || || ||||| Sbjct 369480 CGACTCCGTGGTGG 369493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570305716325840