Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09]
657 sequences; 36,917,822 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq52 102 5e-17
>seq52
Length=836814
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| || ||||| || ||||| ||||| || ||||| || || ||
Sbjct 426725 CCACCGCGAAGACGTAAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGAC 426666
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || ||||| || || || || || | |||||||||||||| ||
Sbjct 426665 AGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGGA 426606
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||| ||||| ||| ||| || || ||| | || |||||| | || ||
Sbjct 426605 ATACCCTCTTTGTCCTGGAT-TTTGGTCTTGACGTTGTCGATGGTGTCTGAGGATTCAAC 426547
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || || ||||| || ||||| || || || ||||||||
Sbjct 426546 CTCCAATGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATCTGCAT 426499
Score = 82.4 bits (90), Expect = 5e-11
Identities = 159/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535
|| |||||| | ||||| | |||||| || | || ||||||||||||||| || ||
Sbjct 426957 GTTGCCGCCACGGAGACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTC 426898
Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595
| || || ||||||| ||||| || || || || || | ||||| ||||| ||
Sbjct 426897 GCTCAACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGG 426838
Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCT 34654
|| | ||| |||||||| ||| ||||| || ||| | || || || |
Sbjct 426837 TGGGATTCCTTCCTTGTC-CTGAATCTTTGTCTTGACGTTGTCGATCGTATCGGATGATT 426779
Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| ||||| | || || || || ||||| | || ||||| |||||||||||
Sbjct 426778 CGACTTCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727079901081
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |