Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09]
657 sequences; 36,917,822 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq52 150 2e-31
seq519 93.3 4e-14
>seq52
Length=836814
Score = 150 bits (166), Expect = 2e-31
Identities = 173/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| ||||||||| | ||||| || ||||| ||| | |||
Sbjct 426727 ATGCAGATTTTCGTGAAGACTCTCACCGGCAAGACCATTACACTCGAAGTCGAATCATCC 426786
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| |||| || | ||||| ||| ||||| ||||| ||||| || ||||| || ||
Sbjct 426787 GATACGATCGACAACGTCAAGACAAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAG 426846
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTC-CGATTACAA 27166
||||| | || | ||| || || ||| |||||||| | || |||| ||| |||||
Sbjct 426847 CAGCGCCTCATCTTCGCAGGAAAGCAACTGGAAGACGGA-CGTACGTTGAGCGACTACAA 426905
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216
|||||||||||||||||| || || ||||| | ||| | || || ||||
Sbjct 426906 CATTCAAAAGGAGTCGACATTGCACTTGGTGCTACGTCTCCGTGGCGGCA 426955
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
|| |||||| | || || || || || || | |||| | || || | |||||
Sbjct 426295 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGACC 426354
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || |||||||| || ||||| ||||| || ||||||||||| || | || ||||||
Sbjct 426355 AAGATCCAAGACAAGGAGGGCATCCCACCAGACCAACAGCGTTTGATCTTTGCGGGCAAA 426414
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| |||| || | ||| | ||||| ||||| || || |||||||| || | ||
Sbjct 426415 CAGCTGGAGGATGGCCGTACCTTGTCCGACTACAATATCCAGAAGGAGTCTACACTCCAC 426474
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || | ||| | || ||||| ||
Sbjct 426475 CTTGTCCTCCGTCTCCGTGGTGGTAT 426500
>seq519
Length=112231
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056
|| || ||||| || ||||| ||| | || |||||||| || ||| |||| ||| | ||
Sbjct 63375 TTCGTCAAAACCCTCACCGGAAAGACCATCACTCTTGAGGTCGAATCGTCTGACACAATC 63316
Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116
|| | ||||| || || || || |||||||| || ||||| || |||||||| |
Sbjct 63315 GACAATGTCAAGACTAAGATCCAGGATAAAGAAGGAATCCCACCAGACCAACAGCGGCTG 63256
Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176
|| | |||||| || || |||| || | ||| | || |||||||||||||||
Sbjct 63255 ATCTTCGCCGGAAAGCAGCTGGAGGATGGACGTACCTTGAGTGACTACAACATTCAAAAG 63196
Query 27177 G 27177
|
Sbjct 63195 G 63195
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434914828232640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |