Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq52 150 2e-31 seq519 93.3 4e-14 >seq52 Length=836814 Score = 150 bits (166), Expect = 2e-31 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||||||| | ||||| || ||||| ||| | ||| Sbjct 426727 ATGCAGATTTTCGTGAAGACTCTCACCGGCAAGACCATTACACTCGAAGTCGAATCATCC 426786 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || |||| || | ||||| ||| ||||| ||||| ||||| || ||||| || || Sbjct 426787 GATACGATCGACAACGTCAAGACAAAGATTCAGGACAAGGAAGGAATCCCACCAGACCAG 426846 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTC-CGATTACAA 27166 ||||| | || | ||| || || ||| |||||||| | || |||| ||| ||||| Sbjct 426847 CAGCGCCTCATCTTCGCAGGAAAGCAACTGGAAGACGGA-CGTACGTTGAGCGACTACAA 426905 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 |||||||||||||||||| || || ||||| | ||| | || || |||| Sbjct 426906 CATTCAAAAGGAGTCGACATTGCACTTGGTGCTACGTCTCCGTGGCGGCA 426955 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071 || |||||| | || || || || || || | |||| | || || | ||||| Sbjct 426295 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGACC 426354 Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 || || |||||||| || ||||| ||||| || ||||||||||| || | || |||||| Sbjct 426355 AAGATCCAAGACAAGGAGGGCATCCCACCAGACCAACAGCGTTTGATCTTTGCGGGCAAA 426414 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || |||| || | ||| | ||||| ||||| || || |||||||| || | || Sbjct 426415 CAGCTGGAGGATGGCCGTACCTTGTCCGACTACAATATCCAGAAGGAGTCTACACTCCAC 426474 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 | || | ||| | || ||||| || Sbjct 426475 CTTGTCCTCCGTCTCCGTGGTGGTAT 426500 >seq519 Length=112231 Score = 93.3 bits (102), Expect = 4e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 26997 TTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATT 27056 || || ||||| || ||||| ||| | || |||||||| || ||| |||| ||| | || Sbjct 63375 TTCGTCAAAACCCTCACCGGAAAGACCATCACTCTTGAGGTCGAATCGTCTGACACAATC 63316 Query 27057 GAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTA 27116 || | ||||| || || || || |||||||| || ||||| || |||||||| | Sbjct 63315 GACAATGTCAAGACTAAGATCCAGGATAAAGAAGGAATCCCACCAGACCAACAGCGGCTG 63256 Query 27117 ATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAG 27176 || | |||||| || || |||| || | ||| | || ||||||||||||||| Sbjct 63255 ATCTTCGCCGGAAAGCAGCTGGAGGATGGACGTACCTTGAGTGACTACAACATTCAAAAG 63196 Query 27177 G 27177 | Sbjct 63195 G 63195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434914828232640