Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq52 159 8e-34 seq519 141 2e-28 seq430 125 2e-23 >seq52 Length=836814 Score = 159 bits (176), Expect = 8e-34 Identities = 170/222 (77%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || ||| | ||| ||||| || || || |||||||| || || | ||||| Sbjct 426719 CGAAGACGTAAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTG 426660 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || || || || ||||| || ||||||||||| || |||||||| || |||| || Sbjct 426659 CGGCCGTCCTCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGGAATACCC 426600 Query 211014 TCCTTGTCCTGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 || ||||||||||| ||| || || ||||| ||||||||||| ||| ||||||||| | Sbjct 426599 TCTTTGTCCTGGAT-TTTGGTCTTGACGTTGTCGATGGTGTCTGAGGATTCAACCTCCAA 426541 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| | ||||| || || | |||||| Sbjct 426540 TGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATCTGCAT 426499 Score = 156 bits (172), Expect = 1e-32 Identities = 170/223 (76%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGG 210951 ||| || | ||| || | ||| | || ||||| ||||| ||||| || || | ||| | Sbjct 426948 ACGGAGACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTCAACG- 426890 Query 210952 TCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTC 211011 | | ||| |||||||| ||||| ||||||||||| ||||| || ||||| || || | || Sbjct 426889 TACGTCCGTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTC 426830 Query 211012 CTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGA 211071 ||||||||||||| |||||| || ||||| ||||| || || || ||| || |||| Sbjct 426829 CTTCCTTGTCCTGAATCTTTGTCTTGACGTTGTCGATCGTATCGGATGATTCGACTTCGA 426770 Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || || ||||| || ||||||||||| || || | |||||| Sbjct 426769 GTGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || ||||| || ||||| || || || | | ||| | ||||| Sbjct 426482 AGGACAAGGTGGAGTGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGGCCATCC 426423 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| ||||| || ||||| | || |||||||| || || | || |||||||| Sbjct 426422 TCCAGCTGTTTGCCCGCAAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCT 426363 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||||||||| | ||||||||||| ||||| ||| Sbjct 426362 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTC 426303 Query 211083 TTTCCCGT 211090 || || || Sbjct 426302 TTGCCAGT 426295 >seq519 Length=112231 Score = 141 bits (156), Expect = 2e-28 Identities = 141/180 (78%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATC-CGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGAT 210985 ||||| ||||| || || | ||||| | | |||||| ||||||||||| || |||||||| Sbjct 63197 TTTTGAATGTTGTAGTCACTCAAGG-TACGTCCATCCTCCAGCTGCTTTCCGGCGAAGAT 63255 Query 210986 AAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTC 211045 || || |||||||| || || | |||||| || ||||||||||| || || || || Sbjct 63256 CAGCCGCTGTTGGTCTGGTGGGATTCCTTCTTTATCCTGGATCTTAGTCTTGACATTGTC 63315 Query 211046 GATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 ||| |||||||| ||| ||||| |||||||| |||||||| ||||| || || || || Sbjct 63316 GATTGTGTCAGACGATTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGGGTTTTGACGAA 63375 >seq430 Length=527729 Score = 125 bits (138), Expect = 2e-23 Identities = 105/129 (81%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| |||| ||||| |||||||| || ||||| ||||||||||| || || | ||||| Sbjct 369488 ACGGAGTCGGAGGACGAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGGATAGGGT 369429 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||| || || |||||||||||||||||||| | ||| || ||||| || |||| ||| Sbjct 369428 TCGTCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATTCC 369369 Query 211013 TTCCTTGTC 211021 ||||||||| Sbjct 369368 TTCCTTGTC 369360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159142242475805