Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq52 123 2e-23 seq519 98.7 7e-16 >seq52 Length=836814 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| || || ||||| || || || || || |||||||| || || | Sbjct 426727 ATGCAGATTTTCGTGAAGACTCTCACCGGCAAGACCATTACACTCGAAGTCGAATCATCC 426786 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || || | || || ||| ||| ||||| ||||| | || ||||| || Sbjct 426787 GATACGATCGACAACGTCAAGAC-AAAGATTCAGGACAAGGAAGGAATCCCACCAGACCA 426845 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||| | || || || || || ||||||||||||| ||| || || |||| ||||| Sbjct 426846 GCAGCGCCTCATCTTCGCAGGAAAGCAACTGGAAGACGGACGTACGTTGAGCGACTACAA 426905 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| ||||| ||||| ||||| || || || Sbjct 426906 CATTCAAAAGGAGTCGACATTGCACTTGGT 426935 Score = 84.2 bits (92), Expect = 1e-11 Identities = 125/175 (71%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 23635 ACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACA 23693 || || || || ||||| ||||| ||||| |||| ||||| | || || | || || Sbjct 426295 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGACC 426354 Query 23694 AAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAA 23753 || | | ||||| || || | || ||||| ||||||||||| || ||||| ||||| Sbjct 426355 AAGA-TCCAAGACAAGGAGGGCATCCCACCAGACCAACAGCGTTTGATCTTTGCGGGCAA 426413 Query 23754 ACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACA 23808 ||| ||||| || | || || || ||| ||||| || || || ||||| ||| Sbjct 426414 ACAGCTGGAGGATGGCCGTACCTTGTCCGACTACAATATCCAGAAGGAGTCTACA 426468 >seq519 Length=112231 Score = 98.7 bits (108), Expect = 7e-16 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678 |||||| ||||||||||| ||||| || |||||||| || || || || | ||||| | Sbjct 63376 TTTCGTCAAAACCCTCACCGGAAAGACCATCACTCTTGAGGTCGAATCGTCTGACACAAT 63317 Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737 || ||| | || || || || || |||||||| | || ||||| |||||||| Sbjct 63316 CGACAATGTCAAGAC-TAAGATCCAGGATAAAGAAGGAATCCCACCAGACCAACAGCGGC 63258 Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797 | || || ||||| || || ||||| || | ||| || || | || |||||||| |||| Sbjct 63257 TGATCTTCGCCGGAAAGCAGCTGGAGGATGGACGTACCTTGAGTGACTACAACATTCAAA 63198 Query 23798 A 23798 | Sbjct 63197 A 63197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338006893493756