Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq52 159 8e-34 seq430 95.1 3e-14 >seq52 Length=836814 Score = 159 bits (176), Expect = 8e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | | ||| | ||| ||||| ||||| || |||| ||||| |||| || || Sbjct 426719 CGAAGACGTAAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTG 426660 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || || ||||| ||||||||||||||||| |||||||| || |||||||| Sbjct 426659 CGGCCGTCCTCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGGAATACCC 426600 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || ||||| ||||| || ||| || |||||||||||||||| ||| || || || Sbjct 426599 TCTTTGTCCTGGATTTTGGTCTTGACGTTGTCGATGGTGTCTGAGGATTCAACCTCCAAT 426540 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| |||||||| || || | ||| | ||||| Sbjct 426539 GTGATGGTCTTACCCGTCAACGTCTTGACGAAGATCTGCAT 426499 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || || || || |||| |||||| |||| ||| || | ||||| Sbjct 426482 AGGACAAGGTGGAGTGTAGACTCCTTCTGGATATTGTAGTCGGACAAGGTACGGCCATCC 426423 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || ||||| | || |||||||| || || || || ||||||||| Sbjct 426422 TCCAGCTGTTTGCCCGCAAAGATCAAACGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCT 426363 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || || || || | ||||| ||| Sbjct 426362 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTC 426303 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 426302 TTGCCAGT 426295 Score = 104 bits (114), Expect = 6e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || || || ||||| | ||||| ||| ||| || | || ||||| || ||||| || Sbjct 426923 GTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTCTTCCAGTTGCTTTCCT 426864 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| || || || ||||| || || || ||||||||||| || |||||| ||| Sbjct 426863 GCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGAATCTTTGTCTTG 426804 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 || ||||| || || || | ||| || || | || || |||||||| || | ||| Sbjct 426803 ACGTTGTCGATCGTATCGGATGATTCGACTTCGAGTGTAATGGTCTTGCCGGTGAGAGTC 426744 Query 225697 TTTATGAACACTTGCAT 225713 || | ||| | ||||| Sbjct 426743 TTCACGAAAATCTGCAT 426727 >seq430 Length=527729 Score = 95.1 bits (104), Expect = 3e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| |||| ||||| ||||| || || || || ||||||| ||||| |||| | || Sbjct 369488 ACGGAGTCGGAGGACGAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGGATAGGGT 369429 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || |||||||| || |||||||| | || || ||||| || ||||| || Sbjct 369428 TCGTCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATTCC 369369 Query 225612 TTCCTTGTCT 225621 |||||||||| Sbjct 369368 TTCCTTGTCT 369359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192521161495958