Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq115 118 1e-21 >seq115 Length=330173 Score = 118 bits (130), Expect = 1e-21 Identities = 474/738 (64%), Gaps = 14/738 (2%) Strand=Plus/Minus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| ||||| || || || ||| || | | |||||||||||| | ||| Sbjct 101855 GTAGAGAGCC--TCAAACTCGTCGCCATAAATGTCGGCGAGTCCAGGGCATTCGTGAGGG 101798 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 ||||||| | ||| || || | | | ||||| ||||| || || || || ||||| Sbjct 101797 CACATCAGCGTCCACTCGCCGTTCTGTTCGACTCGCTTCATGAATAGGTCGGGAATCCAC 101738 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 | ||| || ||||| || | | ||||| || || |||||| | ||||| Sbjct 101737 AAGGCATAGAAAAGATCGCGAGCACGTGCCTCTTCTTTGCCGTGGTTCTTTCTCAGATCC 101678 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 | | | || | ||| | |||||||| || || || || || | | ||||| || Sbjct 101677 AACCAGTTGATGACATCTGCGTGCCATGGCTCGAGGTAAATGGCAAATGCACCAGGACGC 101618 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || || || || ||||| | || | || || | | || | | ||| |||| | Sbjct 101617 TTGTTTCCACCTTGATCGACGTAGCGAGCAGTCGCGTCGAAGACACGGAGCATGGGAACA 101558 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA--TTAC 78270 | ||||| ||||| || |||||||| ||| || ||| | || | ||| | | Sbjct 101557 AGCCCGTTTGATGTGCCGTTTGTTCCTCCAATGTATGATCCGGTGGCTCTGATACGGTGC 101498 Query 78271 TAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTAT 78330 || || | || || || || || |||| || || | || ||| || | || | Sbjct 101497 ACATTGAGA--CCAATACCGCCAGCGGTCTTCGAAATCATCGCACAAGTCTTAAGGGTGT 101440 Query 78331 CGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGAC---ATTT 78387 |||| |||||||| || ||||| || | ||| || || | ||| |||| | | Sbjct 101439 CGTAAATACCCTCAATGCTGTCCTC--TTTTGTATCGATGAGGA-AGCAAGACGAGAGCT 101383 Query 78388 GATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTT-TTCA 78446 | | ||| || ||||||||||| | || || || || || ||||| |||| ||| Sbjct 101382 GTGGTTGAGGTGTGCCTGCATTAAAAAGCGTGGGCGAGGCGTGTGTAAAGTATTTGTTCG 101323 Query 78447 GAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCT 78506 | |||| |||||||| | ||||| | || || ||| ||||| || || ||| Sbjct 101322 ACATGTAG-TTGTATGTCTGGATAGCAGCCTCAATATCCTCCCCGTGAATCCCAACAGCT 101264 Query 78507 ACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTAT 78566 || ||||| | |||||| || || | ||| | ||| |||| | || ||| Sbjct 101263 ACGCGCATGATCATATGTTGTGGACGCTCAGCGACCTTGCCGCTTATCCGGAGCAGGTAC 101204 Query 78567 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATA 78626 ||| || | ||||| |||||||| || | ||| |||||||| ||||| | |||| Sbjct 101203 GATCGCTCGAGCGTTTTGAAACCAAAGTATTGGTAATTGAAGTCTCTGTCGTAGACAATA 101144 Query 78627 ACAGAATTTAGTTTATCT 78644 | || || || | |||| Sbjct 101143 GCGGAGTTCAGCTCATCT 101126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694663095032480