Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq52 159 7e-34 seq519 114 3e-20 seq430 84.2 5e-11 >seq52 Length=836814 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || | |||| || | || ||| || |||||||||||||| | Sbjct 426726 ACCACCGCGAAGACGTAAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGA 426667 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||| ||||| ||||| || || || ||||| | || |||||||| || Sbjct 426666 CAGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGG 426607 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||| ||||| ||||| || | || ||| | ||||| ||||| || | ||| || Sbjct 426606 AATACCCTCTTTGTCCTGGATTTTGGTCTTGACGTTGTCGATGGTGTCTGAGGATTCAAC 426547 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| |||||||||||||| ||||| ||||| |||||||| Sbjct 426546 CTCCAATGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATCTGCAT 426499 Score = 138 bits (152), Expect = 2e-27 Identities = 163/218 (75%), Gaps = 7/218 (3%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| || || || || || || | || || || ||||| |||||||| | Sbjct 426498 ACCACCACGGAGACGGAGGACAAGGTGGAGTGTAGACTCCTTCTGGATATTGTAGTCGGA 426439 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| || ||||||||||| || ||||| || |||||||||||||| |||||||| | Sbjct 426438 CAAG-GTACGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAAACGCTGTTGGTCTGGTG 426380 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || |||||||||||||||||||| | || ||| | ||||| ||||| | || | Sbjct 426379 GGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCGATGGTGTCGCTGGACTCAA 426320 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT-----CAAAGTCT 283083 | ||||| ||||| ||||| || || |||||||| Sbjct 426319 CCTCGAGGGTGATGGTCTTGCCAGTTACTGCAAAGTCT 426282 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || || || || ||||| ||||||||||| Sbjct 426953 CCGCCACGGAGACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTC 426894 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||| || || || || ||||| || || || ||||| | || || ||||| || Sbjct 426893 AACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGG 426834 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| || ||||||| || ||| | ||||| || || || | ||||||| Sbjct 426833 ATTCCTTCCTTGTCCTGAATCTTTGTCTTGACGTTGTCGATCGTATCGGATGATTCGACT 426774 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || || | |||||| ||||| |||||||| Sbjct 426773 TCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 >seq519 Length=112231 Score = 114 bits (126), Expect = 3e-20 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCA-GCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGAT 282970 ||||| |||||||||||| |||| || || |||||||| || || || ||||| ||||| Sbjct 63197 TTTTGAATGTTGTAGTCACTCAAG-GTACGTCCATCCTCCAGCTGCTTTCCGGCGAAGAT 63255 Query 282971 CAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATC 283030 || || |||||||| || || || || || || |||||||| | || || | || Sbjct 63256 CAGCCGCTGTTGGTCTGGTGGGATTCCTTCTTTATCCTGGATCTTAGTCTTGACATTGTC 63315 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| || | |||||| || |||||||| ||||| || || | || || ||||| Sbjct 63316 GATTGTGTCAGACGATTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGGGTTTTGACGAA 63375 >seq430 Length=527729 Score = 84.2 bits (92), Expect = 5e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || ||||||||||||||||| | Sbjct 369494 ACCACCACGGAGTCGGAGGACGAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGGA 369435 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||| || || || || || |||||||| || || ||||| || Sbjct 369434 TAGGGTTCGTCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGG 369375 Query 282992 AATACCCTCCTTGTCT 283007 ||| || ||||||||| Sbjct 369374 AATTCCTTCCTTGTCT 369359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046730388745678