Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq52 100 2e-16 seq430 91.5 1e-13 seq519 89.7 4e-13 >seq52 Length=836814 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| | || ||||||||| |||||||| ||| | || |||| || Sbjct 426936 CACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCTCAACGTACGTCCGTCTTC 426877 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||| ||||| || || ||||| | |||||||| |||| || | |||||||| ||| Sbjct 426876 CAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTG 426817 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | || || |||| ||||| || || | ||||| ||||| Sbjct 426816 AATCTTTGTCTTGACGTTGTCGATCGTATCGGATGATTCGACTTCGAGTGTAATGGTCTT 426757 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||||||||| || ||||| Sbjct 426756 GCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Score = 98.7 bits (108), Expect = 7e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 44126 AACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCG 44185 || |||| ||| || || ||||| ||||||||||| |||| || ||| |||| Sbjct 426710 AAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 426651 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || || ||||| || || ||||| | ||||| || || | || | ||| || || ||| Sbjct 426650 TCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGGAATACCCTCTTTGTCC 426591 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 || || ||| | | | |||||||| | |||||| ||||||| || || ||| Sbjct 426590 TGGATTTTGGTCTTGACGTTGTCGATGGTGTCTGAGGATTCAACCTCCAATGTGATGGTC 426531 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| | ||||| |||||||| ||||| Sbjct 426530 TTACCCGTCAACGTCTTGACGAAGATCTGCAT 426499 >seq430 Length=527729 Score = 91.5 bits (100), Expect = 1e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||||||||||||||| |||| || || |||| || Sbjct 369475 ACGAGGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGGATAGGGTTCGTCCGTCCTCG 369416 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || |||||||| |||||||| |||| || | |||||||| || ||| Sbjct 369415 AGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTGTT 369356 >seq519 Length=112231 Score = 89.7 bits (98), Expect = 4e-13 Identities = 133/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 ||||||| |||||||| || | || | || | || ||||||||||| ||||| ||| Sbjct 63195 CCTTTTGAATGTTGTAGTCACTCAAGGTA-CGTCCATCCTCCAGCTGCTTTCCGGCGAAG 63253 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATG 44264 |||| ||||| || |||| || | ||||| || ||| ||||| ||| || || Sbjct 63254 ATCAGCCGCTGTTGGTCTGGTGGGATTCCTTCTTTATCCTGGATCTTAGTCTTGACATTG 63313 Query 44265 TTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || ||||| | ||||| ||||| | || || |||||||| |||||||| || | Sbjct 63314 T--CGATTGTGTCAGACGATTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGGGTTTTGA 63371 Query 44325 CGAA 44328 |||| Sbjct 63372 CGAA 63375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359987517489369