Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20carpophila_20[genbank_20GCA_5F001990985.1_202017-02-09] 657 sequences; 36,917,822 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq52 156 4e-33 seq430 98.7 9e-16 >seq52 Length=836814 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| |||||||| |||| ||||| || |||||||| ||||| |||||||| Sbjct 426725 CCACCGCGAAGACGTAAGACCAAGTGCAGAGTTGATTCCTTCTGGATGTTGTAGTCGGAC 426666 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| ||||| ||||| || ||||| || || ||||||||||||| ||| Sbjct 426665 AGGGTGCGGCCGTCCTCGAGTTGCTTTCCAGCGAAGATAAGTCGCTGTTGGTCCGGTGGA 426606 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||| |||||| |||||| ||| ||| | | | ||||| || || || Sbjct 426605 ATACCCTCTTTGTCCTGGATTTTGGTCTT-GACGTTGTCGATGGTGTCTGAGGATTCAAC 426547 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || |||||||||| |||||| ||||| |||||||| Sbjct 426546 CTCCAATGTGATGGTCTTACCCGTCAACGTCTTGACGAAGATCTGCAT 426499 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||||| ||||| |||| || |||||| |||||||| |||||| Sbjct 426954 GCCGCCACGGAGACGTAGCACCAAGTGCAATGTCGACTCCTTTTGAATGTTGTAGTCGCT 426895 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 | || || |||| || || ||||| || ||||| || |||||||| ||||| | || Sbjct 426894 CAACGTACGTCCGTCTTCCAGTTGCTTTCCTGCGAAGATGAGGCGCTGCTGGTCTGGTGG 426835 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | ||||||||| ||| | |||| | ||| | | | || ||| || || | Sbjct 426834 GATTCCTTCCTTGTCC-TGAATCTTTGTCTTGACGTTGTCGATCGTATCGGATGATTCGA 426776 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || | || || || || || || || ||||| |||||||||||||| Sbjct 426775 CTTCGAGTGTAATGGTCTTGCCGGTGAGAGTCTTCACGAAAATCTGCAT 426727 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| || || |||||||| Sbjct 426497 CCACCACGGAGACGGAGGACAAGGTGGAGTGTAGACTCCTTCTGGATATTGTAGTCGGAC 426438 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| || | || || ||||| ||||| || || |||| ||||||||||| | || Sbjct 426437 AAGGTACGGCCATCCTCCAGCTGTTTGCCCGCAAAGATCAAACGCTGTTGGTCTGGTGGG 426378 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || ||| ||| | | | |||||||| ||||| || Sbjct 426377 ATGCCCTCCTTGTCTTGGATCTTGGTCTT-GACGTTGTCGATGGTGTCGCTGGACTCAAC 426319 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || || || || || Sbjct 426318 CTCGAGGGTGATGGTCTTGCCAGT 426295 >seq430 Length=527729 Score = 98.7 bits (108), Expect = 9e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||| || ||||| |||||||| ||||| || |||| |||||||||||||| ||||| Sbjct 369458 CTCCTTTTGGATGTTGTAGTCGGATAGGGTTCGTCCGTCCTCGAGCTGCTTGCCTGCGAA 369399 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 |||| |||||| ||||| | ||||| | |||||||| Sbjct 369398 GATCAAGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTC 369360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462300203328400