Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq171 91.5 2e-13 >seq171 Length=70297 Score = 91.5 bits (100), Expect = 2e-13 Identities = 190/281 (68%), Gaps = 3/281 (1%) Strand=Plus/Plus Query 17240 GTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCG 17299 || |||||||| ||| ||| | |||||||| || ||||||||||| ||||| || ||| Sbjct 55051 GTCTCGATGAGAAGGGAGTATGTCTCGGAGTGAATATTCTCCATGGCGATCTGGAAACCG 55110 Query 17300 TAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCG 17359 || |||||||| ||||| | | || ||||| | |||||| || || || || Sbjct 55111 TAGAAGCATCGAGCTTCTGGAACCTGGACTTCATTGCTGAATCGCTCGAGAAGGTTCTCA 55170 Query 17360 TTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCG 17419 || || |||||||| || ||||| || || | || || ||||| | |||| Sbjct 55171 TTGACAATGCCGTCCGATGCTGCGAAGAATGCGAGGATGTGGGAGATGAAGAAGCGTTCG 55230 Query 17420 TC--CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGG 17476 || || || | | |||||| | ||||||||| | ||| | ||||||| Sbjct 55231 TCGTCGTTGAGGCGGTTGTTCCAGTCTGGAACATCTTTGGAGAGATCAATCTCTTCGGCA 55290 Query 17477 GTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 ||||| || |||| ||||| || |||||| ||| || Sbjct 55291 GTCCAGAATGAGGCCATGGCCTTCTTGTACATACGCCAGAT 55331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542074220600