Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq18 104 2e-17 >seq18 Length=328773 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| |||| ||||||||||| || ||||| ||||| | || || | ||||| Sbjct 244373 AGAACCAAGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACCGTCC 244314 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| ||||| ||| |||| || | ||| ||||| || | ||| |||||||| Sbjct 244313 TCGAGCTGCTTGCCGGCAAAAATCAGGCGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCC 244254 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| || || | | ||| || || || |||| |||| |||||||||| Sbjct 244253 TGGATCTTGGTCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTAATGGTC 244194 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || || || || || || || ||||| Sbjct 244193 TTACCCGTCAAGGTCTTCACGAAGATCTGCAT 244162 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| ||||| || ||||| ||||||| |||||| || ||||||| ||||||||||| Sbjct 244130 GTGGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCGTCCTCGAGCTGTTTGCCG 244071 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || | || | | |||||||||| || | ||||||||||| ||||| ||| Sbjct 244070 GCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTTGGTCTTC 244011 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 || | | ||| || || | || ||| || | ||| ||||||||||| || Sbjct 244010 ACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 243958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422256395275220