Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq268 132 1e-25 seq171 102 2e-16 >seq268 Length=30626 Score = 132 bits (146), Expect = 1e-25 Identities = 181/250 (72%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851 || ||||| ||||| ||||| || || || ||||| || || |||||||||||| Sbjct 27428 CCGCCAGCGGTCTTTGAGATCATAGCACAAGTTTTGAGAGTGTCGTAGATACCCTCAATG 27369 Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGAC-TGTTCCACA 94910 || || || | | | | | ||| ||||| ||||||||||| ||| ||| ||| || Sbjct 27368 CTGTCCTCCTTCATGTCAACAAGAAAGCAGGAGGAAAGTTGCGGT-TGAGGTGTGCCTGC 27310 Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970 ||| || || || || |||||||| || || || | || |||||| | || || | Sbjct 27309 ATTGAAAAGGGTAGGCGAAGCATGCGTGAAGTATTTGCTGGACATGTAGTTGTAAGTCTG 27250 Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTG 95030 |||| ||| || ||||| |||||| ||||| |||||||||||||| ||||||| || Sbjct 27249 AATGGCAGCTTCAATGTCCTCTCCGTGGATGCCAACAGCCACACGCATGATCATGTGTTG 27190 Query 95031 AGGGCGCTCA 95040 || |||||| Sbjct 27189 TGGACGCTCA 27180 >seq171 Length=70297 Score = 102 bits (112), Expect = 2e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || || || || || ||||| ||||| || |||||||| |||||||||||||||||| Sbjct 54870 GTCGCATTCGCCGCTGTCGAAGGCATCTTTTTCAGTGGTGCTTTCGCATCCATTTTCTGG 54811 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | |||| || | |||| ||||| ||| |||| ||| | ||| Sbjct 54810 CTCAAGAAACGTGGTCTCATGCCCGGCTTGACCTTTTCCAACGAGCTCATCTCTCGCGAC 54751 Query 102038 GAAGGTCTTCATCGCGACTTTGCATG 102063 || || | || ||||||||| || Sbjct 54750 GAGGGAATGCACACCGACTTTGCCTG 54725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577089920475