Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq268 89.7 6e-13 >seq268 Length=30626 Score = 89.7 bits (98), Expect = 6e-13 Identities = 299/462 (65%), Gaps = 5/462 (1%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||| ||||| || || || || | | || || |||||||||||||| || || | Sbjct 28989 GTGAACTGAATAGGTGCTGAGGCAGCCATGGTTCGAAGATAGTACATTCCAGTCTTCAAG 28930 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | |||| || ||||||||| ||| | |||| | || || || Sbjct 28929 CCCAATTTCCAGCCAGCAAAATGCATGGACGTGATTTTGCCCATGGTAGGCTCCTTCATG 28870 Query 62166 TGGATATTCATAGAT-TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62224 || || |||| || | ||| ||||||||| || || || | || || |||||| | || Sbjct 28869 TGAATGTTCA-AGCTCTGAGATTGATCGATAAACGCACCACGATCGGCGGCCATTGTGAT 28811 Query 62225 GATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62284 ||| || ||| || ||||| | || || || | ||| || || || || | Sbjct 28810 GATGGTACGTTGACTGATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGGAT 28751 Query 62285 GTTTGTA---TTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATT 62341 ||| | | || ||||| || ||||| || | || || | |||||| || | ||| Sbjct 28750 GTTGGGAATGTTTTGAATAGAACCACCCTCGGCAATGATGCGATTCTTCATATTGTCAGA 28691 Query 62342 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCC 62401 ||| | ||||| | | | | || || ||||| || ||||||||||| || Sbjct 28690 CCAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGGGTTGACGACTTGGAATTCGCC 28631 Query 62402 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62461 || | || | || | ||| || || ||||| ||||| | ||||||| || Sbjct 28630 AGCAAGCACACGTCGTGAGTAGATGTTCGACGTATATGGTTCGAAACACTCATTGAAGCC 28571 Query 62462 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62503 || |||||||| || || ||||| ||||| || ||||| || Sbjct 28570 CAGAATTTGAGATGTGGAGGCAGTTGGCATTGGGGCCACTAA 28529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629813309367600