Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq268 131 2e-25 >seq268 Length=30626 Score = 131 bits (144), Expect = 2e-25 Identities = 352/532 (66%), Gaps = 10/532 (2%) Strand=Plus/Minus Query 66170 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 66229 |||||| || |||| || || || | | ||||| || |||||||| ||||| || | Sbjct 27603 ATGCCATGGCTCCAGATAGATTGCGAACGCACCAGGACGCTTGTTTCCACCCTGGTCAAC 27544 Query 66230 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 66289 ||| | ||| || || |||| | | ||| |||| | ||||||||||| || || Sbjct 27543 GTAGCGAGCAGTCGCATCGAAAACACGGAGCATAGGAACTAGTCCATTGGATGTGCCGTT 27484 Query 66290 GGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCC 66347 || || || || |||| | || || || | | ||| ||||| || || Sbjct 27483 TGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGGTGCACGTTG--AGACCAATGCCG 27426 Query 66348 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 66407 || || | || ||||| | || || ||| | || || ||||| ||||| || || Sbjct 27425 CCAGCGGTCTTTGAGATCATAGCACAAGTTTTGAGAGTGTCGTAGATACCCTCAATGCTG 27366 Query 66408 TCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 66467 || ||| |||||| || ||||| ||| || | ||| | || || || ||||| Sbjct 27365 TCCTCCTTCATGTCAACAAGAAAGCAGGAGGAAAGTTGCGGTTGAGGTGTGCCTGCATTG 27306 Query 66468 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTACGTCTCAAT 66526 || | |||||| ||||| ||||| || |||| || | |||| ||||| |||| ||| Sbjct 27305 AAAAGGGTAGGCGAAGCATGCGTGAAGTATTTGCTGGACATGTAG-TTGTAAGTCTGAAT 27247 Query 66527 AGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGG 66586 || | || || ||| | || || || || || |||||||| | |||||| || || Sbjct 27246 GGCAGCTTCAATGTCCTCTCCGTGGATGCCAACAGCCACACGCATGATCATGTGTTGTGG 27187 Query 66587 TCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 66646 | ||| ||| |||| | ||||| || | ||| ||| || | || || || || Sbjct 27186 ACGCTCAGCGACCTTGCCGCTTATTCGCAGTAGGTACGATCGCTCAAGCGTCTTGAAGCC 27127 Query 66647 AAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 66696 ||| || | ||| ||||| |||| ||||| | ||| | ||||| |||| Sbjct 27126 AAAGTATTGGTAGTTGAAA--TCTCTATCGTAGACAATGGCAGAGTTCAGTT 27077 Score = 89.7 bits (98), Expect = 7e-13 Identities = 299/462 (65%), Gaps = 5/462 (1%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||| ||||| || || || || | | || || |||||||||||||| || || | Sbjct 28989 GTGAACTGAATAGGTGCTGAGGCAGCCATGGTTCGAAGATAGTACATTCCAGTCTTCAAG 28930 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958 || | |||| || ||||||||| ||| | |||| | || || || Sbjct 28929 CCCAATTTCCAGCCAGCAAAATGCATGGACGTGATTTTGCCCATGGTAGGCTCCTTCATG 28870 Query 64959 TGGATATTCATAGAT-TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 65017 || || |||| || | ||| ||||||||| || || || | || || |||||| | || Sbjct 28869 TGAATGTTCA-AGCTCTGAGATTGATCGATAAACGCACCACGATCGGCGGCCATTGTGAT 28811 Query 65018 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 65077 ||| || ||| || ||||| | || || || | ||| || || || || | Sbjct 28810 GATGGTACGTTGACTGATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGGAT 28751 Query 65078 GTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 65134 ||| | | || ||||| || ||||| || || || || | |||||| || | ||| Sbjct 28750 GTTGGGAATGTTTTGAATAGAACCACCCTCGGCAATGATGCGATTCTTCATATTGTCAGA 28691 Query 65135 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 65194 ||| | ||||| | | | | || || || || || ||||| ||||| || Sbjct 28690 CCAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGGGTTGACGACTTGGAATTCGCC 28631 Query 65195 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCC 65254 || | || | || | ||| || || ||||| ||||| | | ||||||| || Sbjct 28630 AGCAAGCACACGTCGTGAGTAGATGTTCGACGTATATGGTTCGAAACACTCATTGAAGCC 28571 Query 65255 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 65296 || |||||||| || || ||||| ||||| || ||||| || Sbjct 28570 CAGAATTTGAGATGTGGAGGCAGTTGGCATTGGGGCCACTAA 28529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168316197800