Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq268 149 9e-31 seq171 96.9 5e-15 >seq268 Length=30626 Score = 149 bits (164), Expect = 9e-31 Identities = 471/721 (65%), Gaps = 12/721 (2%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||| | ||||| || | || ||| | | ||||| || |||| ||| ||||||| || | Sbjct 27791 TCGTATTCGTCGCCATATACTTCGGCAAGGCCAGGGCACTCGTGAGGGCACATCAGCGTC 27732 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-TATAAA 79979 || || | | | | || || ||||| || || || |||||||| | || || ||| Sbjct 27731 CATTCGGCGTTCTGTTCAACACGCTTCATGAACAGGTCTGGAATCCACAAGGCGTAGAAA 27672 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 ||||| | | | ||| || || || |||||| | || || | | | Sbjct 27671 -AGATCACGAGCACGCGCCTCTTCTTTACCGTGGTTCTTTCTCAGGTCCAACCAGTTGAA 27613 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCC 80099 || || | |||||| || |||| || || || | | || || || |||||||| || Sbjct 27612 GATGTCGGCATGCCATGGCTCCAGATAGATTGCGAACGCACCAGGACGCTTGTTTCCACC 27553 Query 80100 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 80159 ||| || | ||| | ||| || || |||| | | ||| |||| | |||||||| Sbjct 27552 CTGGTCAACGTAGCGAGCAGTCGCATCGAAAACACGGAGCATAGGAACTAGTCCATTGGA 27493 Query 80160 TGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGA 80217 ||| || || || || || || |||| |||| || || | | ||| ||| Sbjct 27492 TGTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGGTGCACGTTG--AGA 27435 Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277 || || || || || | || ||||| | || || ||| | || || ||||| ||| Sbjct 27434 CCAATGCCGCCAGCGGTCTTTGAGATCATAGCACAAGTTTTGAGAGTGTCGTAGATACCC 27375 Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337 || ||||| || || |||||| || ||||| ||| || | ||| | || || Sbjct 27374 TCAATGCTGTCCTCCTTCATGTCAACAAGAAAGCAGGAGGAAAGTTGCGGTTGAGGTGTG 27315 Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTA 80396 || ||||| || | |||||| ||||| ||||| || |||| |||| |||| ||||| Sbjct 27314 CCTGCATTGAAAAGGGTAGGCGAAGCATGCGTGAAGTATTTGCTGGACATGTAG-TTGTA 27256 Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACAT 80456 |||| ||| || | ||| || ||| | || || || || || |||||||| | ||| Sbjct 27255 AGTCTGAATGGCAGCTTCAATGTCCTCTCCGTGGATGCCAACAGCCACACGCATGATCAT 27196 Query 80457 GTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGT 80516 ||| || || | ||| ||| |||| ||||| || | ||| ||| || | || Sbjct 27195 GTGTTGTGGACGCTCAGCGACCTTGCCGCTTATTCGCAGTAGGTACGATCGCTCAAGCGT 27136 Query 80517 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 80574 || || ||||| || | ||| ||||| |||| ||||| | ||| | ||||| ||| Sbjct 27135 CTTGAAGCCAAAGTATTGGTAGTTGAAA--TCTCTATCGTAGACAATGGCAGAGTTCAGT 27078 Query 80575 T 80575 | Sbjct 27077 T 27077 Score = 96.9 bits (106), Expect = 5e-15 Identities = 364/565 (64%), Gaps = 7/565 (1%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||| ||||| || || || || | | || || |||||||||||||| || || | Sbjct 28989 GTGAACTGAATAGGTGCTGAGGCAGCCATGGTTCGAAGATAGTACATTCCAGTCTTCAAG 28930 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | |||| || |||||||| ||| | |||| | || || || Sbjct 28929 CCCAATTTCCAGCCAGCAAAATGCATGGACGTGATTTTGCCCATGGTAGGCTCCTTCATG 28870 Query 78838 TGGATATTCATAGAT-TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 78896 || || |||| || | ||| ||||||||| || || || | || || |||||| | || Sbjct 28869 TGAATGTTCA-AGCTCTGAGATTGATCGATAAACGCACCACGATCGGCGGCCATTGTGAT 28811 Query 78897 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 78956 ||| || ||| || ||||| | || || || | ||| || || || || | Sbjct 28810 GATGGTACGTTGACTGATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGGAT 28751 Query 78957 GTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATT 79013 ||| | | || ||||| || ||||| || || || || | |||||| || | ||| Sbjct 28750 GTTGGGAATGTTTTGAATAGAACCACCCTCGGCAATGATGCGATTCTTCATATTGTCAGA 28691 Query 79014 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 79073 ||| | ||||| | | | | || || || || || ||||| ||||| || Sbjct 28690 CCAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGGGTTGACGACTTGGAATTCGCC 28631 Query 79074 AGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTTCC 79133 || | || | || | ||| || || ||||||||||| | | ||||| || Sbjct 28630 AGCAAGCACACGTCGTGAGTAGATGTTCGACGTATATGGTTCGAAACACTCATTGAAGCC 28571 Query 79134 CAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA-TTTCTAAGAC 79192 || |||||||| || || || |||||||| || ||||| || || | | || | | | Sbjct 28570 CAGAATTTGAGATGTGGAGGCAGTTGGCATTGGGGCCACTAA-AAGCGAGTTGCGGACGC 28512 Query 79193 CGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACAT 79252 ||| | | || | | | || || || ||||| ||||| ||||| | || || | Sbjct 28511 CGTGCTTTTTTATATCAGCCTTGAGCGAATCCCAGTCCCAGAGATCTGTTGGTGTGACGT 28452 Query 79253 TCCAAAGATCATATTGTAGAATACC 79277 |||| | ||||||||||| ||||| Sbjct 28451 TCCACATGTCATATTGTAGGATACC 28427 >seq171 Length=70297 Score = 96.9 bits (106), Expect = 5e-15 Identities = 288/443 (65%), Gaps = 6/443 (1%) Strand=Plus/Plus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 || ||||| ||||| |||||||| ||||| ||||| || ||||| | | || || || Sbjct 54434 TTCTGGTAATCACCGACACGTTTCTCGAAGAAATTTGTCTTTCCGGCGAGAGAGATGTTC 54493 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 |||||||| || || ||||| | ||||||| | || | || | | || | Sbjct 54494 TCCATGAAGTCGAAGGGATTCACAGCATTATAGACCTTGACATTGCCGAGTGCAAGCAAG 54553 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | | ||| |||||||| || || ||| ||| | | ||||||| || | ||| Sbjct 54554 AGACGATCAGCGACAAACTCAATGTATTGGCACATGAGCCCTGAATTCATGCCGAGCAGT 54613 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 | ||| || ||| | | | |||||||| ||||| || || || || || || Sbjct 54614 CTGCATGGTAGTGCCTCGCTCAAGAATTCTTGCTCAATTTGAACTGCCTCCGTGATGATG 54673 Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAAT---AAATGTTTAAACATCAAACATGCG 49965 | | || | ||||| | || | | | ||| || | | ||| || Sbjct 54674 GCGCGGACAG---CTTCAGGAGCAGGCTTCTTGTTGAGTTGTGAGAAAAGGAGACAGGCA 54730 Query 49966 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 50025 || ||| ||||| |||||||| | | || || ||||||||||| || | |||||| Sbjct 54731 AAGTCGGTGTGCATTCCCTCGTCGCGAGAGATGAGCTCGTTGGAAAAGGTCAAGCCGGGC 54790 Query 50026 ATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCT 50085 || || ||||| || || ||||| || ||||| || || | ||| || ||||| ||| Sbjct 54791 ATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGCACCACTGAAAAAGATGCCT 54850 Query 50086 TCTACTGCGGCAAAGGCAACAAG 50108 || || ||||| || || || || Sbjct 54851 TCGACAGCGGCGAATGCGACTAG 54873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718263906793800