Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq18 84.2 2e-11 >seq18 Length=328773 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/194 (70%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| |||||||||||||| ||| || | || |||| ||||| ||| || | Sbjct 244581 CTCCTTCTGAATGTTGTAATCGCTCAACGTACGTCCATCTTCCAATTGCTTTCCGGCGAA 244522 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 || | ||||| || || || | || ||||||||| |||||| ||||| | Sbjct 244521 GATGAGGCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCCTGGATTTTCGTCTTGACGTT 244462 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || || ||||||| ||| || |||| || ||||| || ||||||||||| || Sbjct 244461 GTCG--ATCGTATCGGAAGATTCAACTTCGAGCGTAATGGTCTTGCCGGTGAGAGTCTTG 244404 Query 48713 ACAAAAATCTGCAT 48726 || ||||| ||||| Sbjct 244403 ACGAAAATTTGCAT 244390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248401970545