Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq18 100 3e-16 >seq18 Length=328773 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 |||||||||||| || || ||||| || | ||| |||||||||| || ||| || Sbjct 244599 CACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGCTCAACGTACGTCCATCTTC 244540 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || || |||||| | ||||| | | || || ||||| |||||||| || ||||| | Sbjct 244539 CAATTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCCTG 244480 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||||| | ||||||| | ||| || || | || || || | ||| ||||| || Sbjct 244479 GATTTTCGTCTTGACGTTGTCGATCGTATCGGAAGATTCAACTTCGAGCGTAATGGTCTT 244420 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| || || || || ||||| Sbjct 244419 GCCGGTGAGAGTCTTGACGAAAATTTGCAT 244390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288146016200