Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq117 109 9e-20 seq135 107 3e-19 >seq117 Length=112269 Score = 109 bits (120), Expect = 9e-20 Identities = 85/99 (86%), Gaps = 2/99 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| ||||||||| |||||||| || |||||||||||||| || Sbjct 110948 GCCAAGCGCCACCGAAAGAT-TCTTCGAGACAACATCCAGGGTATCACCAAGCCAGCCAT 111006 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||||||| |||||||||||||| ||||||||| |||| Sbjct 111007 TCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 111045 Score = 86.0 bits (94), Expect = 1e-12 Identities = 119/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA-AGACCGTTATCCATGAT 16594 || |||| ||||| | |||| |||| | || ||||| || || | || |||| ||| Sbjct 111104 TGATCTACGAAGAAACCCGTGGTGTTCTCAA-ATCTTTCTTGGAGTCTGTCATCCGAGAT 111162 Query 16595 GCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTAT 16654 ||| || || || |||||||| || || ||||||||||||||| | ||| | |||||| Sbjct 111163 GCTGTCACATACACTGAGCACGCCAAGCGAAAGACTGTCACCTCCCTCGATGTTGTCTAT 111222 Query 16655 GCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTA 16698 || | || || |||||||| | | || ||||| || |||| Sbjct 111223 GCGCTCAAGCGACAAGGCCGCACTTTGTACGGTTTCGGTGGTTA 111266 >seq135 Length=99774 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| |||||||| |||||||| || Sbjct 68032 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGAATCACGAAGCCAGCCAT 68090 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| ||||||||||| || || |||||| | |||| Sbjct 68091 CCGTCGTCTCGCTCGTCGTGGCGGTGTGAAGCGTATTTCTG 68131 Score = 107 bits (118), Expect = 3e-19 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| ||||| ||| ||||| |||||| | |||| |||| ||| | Sbjct 68194 TGATCTACGAAGAGACTCGTGGTGTCCTGAAGTCATTCCTCGAATCCGTCATCCGTGACG 68253 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || ||||||||||||||| || || ||||| |||||||| | ||| ||||||| | Sbjct 68254 CCGTCACCTATACCGAGCACGCAAAGCGCAAGACCGTCACCTCGCTCGATGTCGTCTACG 68313 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | |||| || || ||||| | | || ||||| || ||||| Sbjct 68314 CTCTGAAGCGACAGGGCCGCACCCTGTACGGTTTCGGTGGTTAA 68357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074701702685