Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq268 134 2e-26 seq171 91.5 2e-13 >seq268 Length=30626 Score = 134 bits (148), Expect = 2e-26 Identities = 489/756 (65%), Gaps = 12/756 (2%) Strand=Plus/Minus Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 || || | |||||| || |||| || || || | | ||||| || |||||||| ||| Sbjct 27611 ATGTCGGCATGCCATGGCTCCAGATAGATTGCGAACGCACCAGGACGCTTGTTTCCACCC 27552 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | ||| | ||| || || |||| | | ||| |||| | || || ||| Sbjct 27551 TGGTCAACGTAGCGAGCAGTCGCATCGAAAACACGGAGCATAGGAACTAGTCCATTGGAT 27492 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGATAGAC 63495 | || || || || || || |||| |||| || || | | |||| ||| Sbjct 27491 GTGCCGTTTGTTCCTCCAATGTATGATCCAGTGGCTCGGATGCGGTGCACGTTGA--GAC 27434 Query 63496 CTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCT 63555 | || || || || | || ||||| | || || ||| | ||||| |||||||||| Sbjct 27433 CAATGCCGCCAGCGGTCTTTGAGATCATAGCACAAGTTTTGAGAGTGTCGTAGATACCCT 27374 Query 63556 CTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTC 63615 | ||||| || || |||||| || ||||| ||| || | ||| | || || | Sbjct 27373 CAATGCTGTCCTCCTTCATGTCAACAAGAAAGCAGGAGGAAAGTTGCGGTTGAGGTGTGC 27314 Query 63616 CCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGA-AAGTAGATTGTAC 63674 | ||||| || | |||||| ||||| ||||| || |||| || | |||| ||||| Sbjct 27313 CTGCATTGAAAAGGGTAGGCGAAGCATGCGTGAAGTATTTGCTGGACATGTAG-TTGTAA 27255 Query 63675 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 63734 |||| ||| || | || || ||| | || || || || || |||||||| | |||| Sbjct 27254 GTCTGAATGGCAGCTTCAATGTCCTCTCCGTGGATGCCAACAGCCACACGCATGATCATG 27195 Query 63735 TGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTT 63794 || || || | ||| ||| |||| | ||||| || | ||| ||| || | || Sbjct 27194 TGTTGTGGACGCTCAGCGACCTTGCCGCTTATTCGCAGTAGGTACGATCGCTCAAGCGTC 27135 Query 63795 TTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 63852 || || ||||| || | ||| ||||| |||| ||||| | ||| | ||||| |||| Sbjct 27134 TTGAAGCCAAAGTATTGGTAGTTGAAA--TCTCTATCGTAGACAATGGCAGAGTTCAGTT 27077 Query 63853 TATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCC 63912 ||| | || | || ||| ||| | || || || ||| | | || Sbjct 27076 CGTCCGCGTGCTTCATGACGGTATTGTATGTGGTGTCCGATATCATAGGACATTTCTTAT 27017 Query 63913 CATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttG 63972 || || ||||| | || | | | | || | || || || ||| | || |||| Sbjct 27016 TGTTCTTTGGATTGATGTAATCGTAGAGGTCTTGGATGACAGCAGAGAATTGCTTCTTTG 26957 Query 63973 TTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTT 64032 | | |||||| |||||||| ||||| || | || || || || || || || ||||| | Sbjct 26956 TCTGCTTGTGGAGATTTGACACGGCAATACGTGCCGCGAGGATTGCGTAGTCGGGATG-T 26898 Query 64033 GTGTAGTACAAGT-GGCTGCTATTTCGGCTGCCAGA 64067 ||| | || || ||| ||| | || || ||| || Sbjct 26897 GTGACGGTCATGTAGGCAGCTGTCTCAGCAGCCTGA 26862 Score = 86.0 bits (94), Expect = 8e-12 Identities = 298/462 (65%), Gaps = 5/462 (1%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||| ||||| || || || || | | || || |||||||||||||| || || | Sbjct 28989 GTGAACTGAATAGGTGCTGAGGCAGCCATGGTTCGAAGATAGTACATTCCAGTCTTCAAG 28930 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62114 || | |||| || ||||||||| ||| | |||| | || || || Sbjct 28929 CCCAATTTCCAGCCAGCAAAATGCATGGACGTGATTTTGCCCATGGTAGGCTCCTTCATG 28870 Query 62115 TGGATATTCATAGAT-TGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 62173 || || |||| || | ||| ||||||||| || || || | || || |||||| | || Sbjct 28869 TGAATGTTCA-AGCTCTGAGATTGATCGATAAACGCACCACGATCGGCGGCCATTGTGAT 28811 Query 62174 GATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAG 62233 ||| || ||| || ||||| | || || || | ||| || || || || | Sbjct 28810 GATGGTACGTTGACTGATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGGAT 28751 Query 62234 GTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATT 62290 ||| | | || ||||| || ||||| || || || || | |||||| || | ||| Sbjct 28750 GTTGGGAATGTTTTGAATAGAACCACCCTCGGCAATGATGCGATTCTTCATATTGTCAGA 28691 Query 62291 CCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCC 62350 ||| | ||||| | | | | || || || || || ||||| ||||| || Sbjct 28690 CCAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGGGTTGACGACTTGGAATTCGCC 28631 Query 62351 AGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCC 62410 || | || | || | ||| || || ||||| ||||| | ||||||| || Sbjct 28630 AGCAAGCACACGTCGTGAGTAGATGTTCGACGTATATGGTTCGAAACACTCATTGAAGCC 28571 Query 62411 CAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAA 62452 || |||||||| || || ||||| ||||| || ||||| || Sbjct 28570 CAGAATTTGAGATGTGGAGGCAGTTGGCATTGGGGCCACTAA 28529 >seq171 Length=70297 Score = 91.5 bits (100), Expect = 2e-13 Identities = 283/437 (65%), Gaps = 6/437 (1%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 || ||||| ||||| |||||||| ||||| ||||| || ||||| | | || || || Sbjct 54434 TTCTGGTAATCACCGACACGTTTCTCGAAGAAATTTGTCTTTCCGGCGAGAGAGATGTTC 54493 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| || || ||||| | ||||||| | || | || | | || | Sbjct 54494 TCCATGAAGTCGAAGGGATTCACAGCATTATAGACCTTGACATTGCCGAGTGCAAGCAAG 54553 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 | | ||| ||||| || || || ||| ||| | | ||||||| || | ||| Sbjct 54554 AGACGATCAGCGACAAACTCAATGTATTGGCACATGAGCCCTGAATTCATGCCGAGCAGT 54613 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 33252 | ||| || ||| | | | |||||||| ||||| || || || || || || Sbjct 54614 CTGCATGGTAGTGCCTCGCTCAAGAATTCTTGCTCAATTTGAACTGCCTCCGTGATGATG 54673 Query 33253 GATCTAACGGTTTCTTCACTCGGTGGATGCAAT---AAATGTTTAAACATCAAACATGCG 33309 | | || | ||||| | || | | | ||| || | | ||| || Sbjct 54674 GCGCGGACAG---CTTCAGGAGCAGGCTTCTTGTTGAGTTGTGAGAAAAGGAGACAGGCA 54730 Query 33310 AAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGC 33369 || ||| ||||| |||||||| | | || || ||||||||||| || | |||||| Sbjct 54731 AAGTCGGTGTGCATTCCCTCGTCGCGAGAGATGAGCTCGTTGGAAAAGGTCAAGCCGGGC 54790 Query 33370 ATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCT 33429 || || ||||| || || ||||| || ||||| ||||| | ||| || ||||| ||| Sbjct 54791 ATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGCACCACTGAAAAAGATGCCT 54850 Query 33430 TCTACTGCAGCAAAGGC 33446 || || || || || || Sbjct 54851 TCGACAGCGGCGAATGC 54867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622942956172200