Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq268 282 1e-70 seq171 114 3e-20 >seq268 Length=30626 Score = 282 bits (312), Expect = 1e-70 Identities = 1164/1821 (64%), Gaps = 76/1821 (4%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 |||||| | ||| ||| |||||| || || | || | | | ||| || || || Sbjct 27133 AAGACGCTTGAGCGATCGTACCTACTGCGAATAAGCGGCAAGGTCGCTGAGCGTCCACAA 27192 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | |||||||| ||| |||| ||||| | ||| |||| || || ||| | Sbjct 27193 CACATGATCATGCGTGTGGCTGTTGGCATCCACGGAGAGGACATTGAAGCTGCCATTCAG 27252 Query 363520 ACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAACAATGTACAATG 363577 || || || || | | || | | || |||||||| || |||| || | | ||||| Sbjct 27253 ACTTACAA-CTAC-ATGTCCAGCAAATACTTCACGCATGCTTCGCCTACCCTTTTCAATG 27310 Query 363578 CTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCA 363637 | || || | | | || || | || || ||||||||| | | |||||||| || || Sbjct 27311 CAGGCACACCTCAACCGCAACTTTCCTCCTGCTTTCTTGTTGACATGAAGGAGGACAGCA 27370 Query 363638 TCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAA 363697 | |||||||||| ||||| || || | ||||||| | || || |||| || ||||| | Sbjct 27371 TTGAGGGTATCTACGACACTCTCAAAACTTGTGCTATGATCTCAAAGACCGCTGGCGGCA 27430 Query 363698 TTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAA-CAGTTACATTCGCGGCACAGGGG 363754 ||||| | | || | ||| | || || || | | || |||||| | || ||| | Sbjct 27431 TTGGTCTCAACG-TGCACCGCATCCGAGCCACTGGATCA--TACATTGGAGGAACAAACG 27487 Query 363755 GATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCG 363814 | || ||||| || ||||| ||||| ||||| || || ||||| | ||||| | Sbjct 27488 GCACATCCAATGGACTAGTTCCTATGCTCCGTGTTTTCGATGCGACTGCTCGCTACGTTG 27547 Query 363815 ACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCG 363874 ||||||||||| ||||| || ||||| || || ||||| ||||| ||||||| Sbjct 27548 ACCAGGGTGGAAACAAGCGTCCTGGTGCGTTCGCAATCTATCTGGAGCCATGGCATGCCG 27607 Query 363875 ATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTG 363934 | || || | | | || || | || ||| || ||||| || |||||| |||| Sbjct 27608 ACATCTTCAACTGGTTGGACCTGAGAAAGAACCACGGTAAAGAAGAGGCGCGTGCTCGTG 27667 Query 363935 ATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAA-- 363992 |||| ||||| || | ||| || | |||| || |||||||| || || ||| || Sbjct 27668 ATCTTTTCTACGCCTTGTGGATTCCAGACCTGTTCATGAAGCGTGTTGA-ACAG--AACG 27724 Query 363993 --GAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGAC 364050 ||| ||| | || | ||||| ||||| || || || ||| |||| |||| || ||| Sbjct 27725 CCGAA-TGGACGCTGATGTGCCCTCACGAGTGCCCTGGCCTTGCCGAAGTATATGGCGAC 27783 Query 364051 GACTATGTTGCTCTATACGAAAAGTA---TGA----------------ATCGG------- 364084 || || | || |||||||||||||| ||| || || Sbjct 27784 GAATACGAGGCCCTATACGAAAAGTAAGTTGACAGTGAAGTGTGTGACATTGGTGCTAAC 27843 Query 364085 -------AGG-----GAAAG--------GCTCGTAAGACAATTCCCGCACAGAAGCTATG 364124 ||| ||||| | ||| |||| |||| || || ||||| || Sbjct 27844 AGCTTCCAGGTATGAGAAAGAAGGCCGTGGTCGCGAGACTATTCGTGCCCAAAAGCTTTG 27903 Query 364125 GTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTC 364184 || |||||| | | | |||| ||||| || | || | ||| | |||||||| | Sbjct 27904 GTATGCCATTCTACAAGCCCAGACCGAGACTGGCAATCCTTTCATGCTCTACAAAGACGC 27963 Query 364185 GTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTA 364243 ||||| || ||| ||||||| || |||| || || |||| |||| | || | || | Sbjct 27964 CTGCAATCGGAAGAGCAACCAGAAGAACCTGGGAACCATTC-GCAGCTCTAATTTGTGCA 28022 Query 364244 CCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCG 364303 ||||||| ||||| ||| | || || || ||| ||| ||||| ||| | || || || | Sbjct 28023 CCGAGATCATTGAGTACTCTGCACCAGATGAGGTTGCTGTATGCAACTTGGCATCTATGG 28082 Query 364304 CGCTTCCGGCGTTTGTAAAAG----ATGGTACTTTT--GACCACCAGCATCTTTATGACG 364357 | |||||| | ||||| | | | | | | | || |||| | | | || | Sbjct 28083 CACTTCCGACCTTTGTTGACGTCCAACGCGGCGTCTACGATTTCCAGAAGTTGCACGAAG 28142 Query 364358 TAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTC 364417 | ||| | || | |||| | | ||| | || || ||| | ||||| ||| Sbjct 28143 TTACCCAGACTGTCATCCGCAACTTGAATAAGATCATTGATGTCAATCACTATCCTGTTC 28202 Query 364418 CTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCG 364477 ||||||| | || |||||||| || | || |||| |||||||| || | Sbjct 28203 CTGAAGCATACAACAGCAACTCCCGTCATCGTCCAGTCGGAGTTGGCGTACAGGGTCTTG 28262 Query 364478 CTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATA 364537 |||| | ||| | ||| || | || || || ||||| || || |||| Sbjct 28263 CTGATGCTTTCCTCGCGCTTCGTCTGCCTTTCGAGTCTCCTGAAGCAAAGAAGCTCAATA 28322 Query 364538 AGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAA 364597 | ||||| ||||| || || || || |||| |||| || | | ||| || Sbjct 28323 TTCAAATCTTCGAAACCATTTACCACGCTGCCTTGACCTCTTCCTGCAAACTTGCACAAG 28382 Query 364598 CCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTG 364657 |||| | |||| | || |||| || || | ||||| || | | || | || Sbjct 28383 AAGAGGGTACGTACCAATCCTACAAGGGCTCTCCAGTATCGCAAGGTATCCTACAATATG 28442 Query 364658 ATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTA 364717 | | ||||| ||||| ||| | | | ||| |||||||| |||| | | | | Sbjct 28443 ACATGTGGAACGTCACACCAACAGATCTCTGGGACTGGGATTCGCTCAAGGCTGATATAA 28502 Query 364718 AGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCAC 364777 | ||||| || |||||||| || | || || ||||| || || || || | | Sbjct 28503 AAAAGCACGGCGTCCGCAACTCGCTTTTAGTGGCCCCAATGCCAACTGCCTCCACATCTC 28562 Query 364778 AGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGG 364837 | || || || ||| ||||| |||||||| | ||| || | || ||||| || | Sbjct 28563 AAATTCTGGGCTTCAATGAGTGTTTCGAACCATATACGTCGAACATCTACTCACGACGTG 28622 Query 364838 TTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCG 364897 | ||| | || ||||| | || || || | ||| |||||||||| ||| | Sbjct 28623 TGCTTGCTGGCGAATTCCAAGTCGTCAACCCATGGCTACTCAAGGATCTCGTCGAGATGG 28682 Query 364898 GGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACA 364957 | || ||| ||||| |||||||| ||||| |||| ||||||| | || |||| Sbjct 28683 GTCTCTGGTCTGACAATATGAAGAATCGCATCATTGCCGAGGGTGGTTCTATTCAAAACA 28742 Query 364958 TTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAAT--TTCCAT 365015 |||| | || || || | ||| || | ||||| ||||| ||||| || || | Sbjct 28743 TTCCCAACATCCCCGATGACATCAAGGCTCTCTACAAGACCGTCTGGGAGATCAGTCAA- 28801 Query 365016 GCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTT 365075 || || |||| ||||| |||||||| ||||| |||||| ||| ||| || Sbjct 28802 -CGTACCATCATCACAATGGCCGCCGATCGTGGTGCGTTTATCGATCAATCTCAGAGCTT 28860 Query 365076 TAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTG 365135 ||| | ||||| |||| ||| | ||| | || ||||||||||| || || Sbjct 28861 GAACATTCACATGAAGGAGCCTACCATGGGCAAAATCACGTCCATGCATTTTGCTGGCTG 28920 Query 365136 GAAATCCGGTCTTAAGACAGG 365156 ||||| || | ||||| || Sbjct 28921 GAAATTGGGCTTGAAGACTGG 28941 >seq171 Length=70297 Score = 114 bits (126), Expect = 3e-20 Identities = 338/518 (65%), Gaps = 6/518 (1%) Strand=Plus/Minus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCA---TTCGCGGAACGT 22494 || ||||| || ||||| |||| ||||| | |||| ||| |||||| || Sbjct 54933 AAGAAGGCTGACTGGGCATTGAAGTGGATCTGCGATGACAATTCTACGTTCGCGTCGCGC 54874 Query 22495 CTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTT 22554 || | ||||| || | || |||||||| || || ||| || || | || || Sbjct 54873 CTAGTCGCATTCGCCGCTGTCGAAGGCATCTTTTTCAGTGGTGCTTTCGCATCCATTTTC 54814 Query 22555 TGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGA 22614 ||||| || ||||||| | ||||| || | || ||||| || ||| | || || Sbjct 54813 TGGCTCAAGAAACGTGGTCTCATGCCCGGCTTGACCTTTTCCAACGAGCTCATCTCTCGC 54754 Query 22615 GATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAA 22674 || ||||| | || ||||| ||||| ||| | || | || | || ||| | || Sbjct 54753 GACGAGGGAATGCACACCGACTTTGCCTGTCTCCTTT-TCTCA--CAACTCAACAAGAAG 54697 Query 22675 CTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTT 22734 | | | |||| |||| | | || || || | |||||| || |||| | ||| Sbjct 54696 CCTGCTCCTGAAGCTGTCCGCGCCATCATCACGGAGGCAGTTCAAATTGAGCAAGAATTC 54637 Query 22735 ATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATAT 22794 | ||||||| ||||| || || | || || ||| | | ||| | ||| Sbjct 54636 TTGAGCGAGGCACTACCATGCAGACTGCTCGGCATGAATTCAGGGCTCATGTGCCAATAC 54577 Query 22795 ATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTC 22854 ||| | ||||| || |||||||| || || ||||||| ||| ||| ||||| | Sbjct 54576 ATTGAGTTTGTCGCTGATCGTCTCTTGCTTGCACTCGGCAATGTCAAGGTCTATAATGCT 54517 Query 22855 GTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAA 22914 || ||||| || || | ||||| || || || | |||||||| ||||||||||| Sbjct 54516 GTGAATCCCTTCGACTTCATGGAGAACATCTCTCTCGCCGGAAAGACAAATTTCTTCGAG 54457 Query 22915 AAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGA 22952 ||| | || ||||| ||||| || || || || ||||| Sbjct 54456 AAACGTGTCGGTGATTACCAGAAGGCCGGCGTGATGGA 54419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303344498926190