Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq18 136 4e-27 seq171 123 2e-23 seq16 98.7 9e-16 seq13 86.0 6e-12 >seq18 Length=328773 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| ||||| || || | |||||||||||| ||||||||||||||||| Sbjct 244617 GCCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGCT 244558 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || || || || || | ||||| || ||| |||| | ||||| ||||| || || Sbjct 244557 CAACGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGG 244498 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||||||| ||||| | || | ||||||| || || | Sbjct 244497 AATACCCTCCTTGTCCTGGATTTTCGTCTTGACGTTGTCGATCGTATCGGAAGATTCAAC 244438 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || ||||| ||||| || |||||||| ||||| Sbjct 244437 TTCGAGCGTAATGGTCTTGCCGGTGAGAGTCTTGACGAAAATTTGCAT 244390 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || || || | || |||||||| || |||||||| ||| | Sbjct 244388 CCACCGCGGAGACGTAGAACCAAGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 244329 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| || | || | ||||| ||||| || ||| Sbjct 244328 AATGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAAATCAGGCGCTGTTGGTCTGGTGGG 244269 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | |||||| | Sbjct 244268 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCCGAGGACTCCACC 244209 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| ||| ||||| || | || || ||||| |||||||| Sbjct 244208 TCCAAGGTAATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 244162 Score = 96.9 bits (106), Expect = 3e-15 Identities = 125/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || || ||||| || |||||||| || | ||| || |||||| ||||| ||||| Sbjct 244130 GTGGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCGTCCTCGAGCTGTTTGCCG 244071 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| ||||||||||||||||| ||||||||||| ||||| || || ||| Sbjct 244070 GCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTTGGTCTTC 244011 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGT 131210 | | || | || ||| ||||||| | |||| ||| | ||| || || || Sbjct 244010 ACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 243958 >seq171 Length=70297 Score = 123 bits (136), Expect = 2e-23 Identities = 342/514 (67%), Gaps = 13/514 (3%) Strand=Plus/Minus Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146 || ||| | |||||||| | |||||||| ||||||||||| | || | || Sbjct 54945 CCCTGCATTCGCAAGAAGGCTGACTGGGCATTGAAGTGGATCTGCGATGACAATTCTACG 54886 Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 ||||| ||| | || || || || ||| || ||| ||||||| ||| ||| Sbjct 54885 TTCGCGTCGCGCCTAGTCGCATTCGCCGCTGTCGAAGGCATCTTTTTCAGTGGTGCTTTC 54826 Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 || |||| || | |||| || | || | ||||||||||| |||| ||| |||||| Sbjct 54825 GCATCCATTTTCTGGCTCAAGAAACGTGGTC-TCATGCCCGGCTTGACCTTTTCCAACGA 54767 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAAC-ACT 46323 ||| || || ||||||||||| |||| || |||||||| ||||| || | | || ||| Sbjct 54766 GCTCATCTCTCGCGACGAGGGAATGCACACCGACTTTGCCTGTCTCCTTTTCTCACAACT 54707 Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCC 46383 | || | |||| ||| || || | || | ||| ||| |||||| || Sbjct 54706 C-----AACAAGAAGCCTGCTCCTGAAGCTGTCCGCGCCATCATCACGGAGGCAGTTCAA 54652 Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCC-CGCTGCCCTGCTGGGCATGAACGCACA 46442 |||||| | || || || | | ||||| || || | ||||| |||||||| || Sbjct 54651 ATTGAGCAAGAATTCTTGAGCGAGGCACTACCATGCAG-ACTGCTCGGCATGAATTCAGG 54593 Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCT-CGTGCAGCTTCACCAGC 46501 | |||||| | ||||| |||||||| || || || || | | |||| || | | Sbjct 54592 GCTCATGTGCCAATACATTGAGTTTGTCGCTGATCGTCTCTTGCTTGCA-CTCGGCAATG 54534 Query 46502 CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCA 46561 ||| | | | || ||||| || || || ||| | |||||||| || | || | Sbjct 54533 TCAAGGTCTATAATGCTGTGAATCCCTTCGACTTCATGGAGAACATCTCTCTCGCCGGAA 54474 Query 46562 AAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 | || ||||| ||||| || || ||||| || || Sbjct 54473 AGACAAATTTCTTCGAGAAACGTGTCGGTGATTA 54440 >seq16 Length=359911 Score = 98.7 bits (108), Expect = 9e-16 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 |||||||||||||| |||||||| ||| | ||||| |||||| |||||||| ||| Sbjct 61112 GTCGACTCCTTTTGGATGTTGTAGTCGGATAGAGTGCGGCCGTCCTCGAGCTGCTTTCCT 61171 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144 ||| |||| || || |||||||| ||||| || ||||| ||||| || Sbjct 61172 GCGAAGATCAAGCGTTGCTGGTCTGGAGGAATCCCTTCCTTGTCTGT 61218 >seq13 Length=375566 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| || |||||||| ||||||| ||||| ||||||| ||||| || ||| ||| Sbjct 315033 CCTTCTGGATGTTGTAGTCGCTCAAAGTGCGTCCATCCTCTAATTGCTTCCCGGCGAAGA 314974 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||| || || || || |||||||||||||| || || |||| | | Sbjct 314973 TCAACCGCTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGTATCTTGGTTTTGACATTAT 314914 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || | |||||| | || | || | ||| || || ||||| || || |||| Sbjct 314913 CGATGGTGTCTGAGGACTCAACCTCAAGAGTTATGGTCTTTCCCGTTAGGGTCTTGACGA 314854 Query 131225 AA 131226 || Sbjct 314853 AA 314852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472009584412800