Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq18 107 1e-18 >seq18 Length=328773 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| || || ||| |||||| || || ||||| || | Sbjct 244390 TACCACCGCGGAGACGTAGAACCAAGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGG 244331 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| || |||| || | || || |||||||| || ||||| ||||| || | | Sbjct 244330 ACAATGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAAATCAGGCGCTGTTGGTCTGGTG 244271 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||| || |||||| || || ||| || || | || || || || | Sbjct 244270 GGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCCGAGGACTCCA 244211 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || ||||| || |||||||||||||| |||||||| |||||||| Sbjct 244210 CCTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 244162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334944975217895