Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq18 116 3e-21 >seq18 Length=328773 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 |||||||| || | | || || || | || || || || |||||||||||||||||| Sbjct 244616 CCGCCACGAAGACGGAGCACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGCTC 244557 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||||| |||||| | ||| || || ||| ||||||| ||||||||||| || ||| Sbjct 244556 AACGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGA 244497 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGT-TTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || || || ||||| || ||| || || | | || | || |||| ||||| || Sbjct 244496 ATACCCTCCTTGTCCTGGAT-TTTCGTCTTGACGTTGTCGATCGTATCGGAAGATTCAAC 244438 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || |||||||| ||||| || || ||||| ||||| Sbjct 244437 TTCGAGCGTAATGGTCTTGCCGGTGAGAGTCTTGACGAAAATTTGCAT 244390 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | ||| || || | ||| || || || || |||||||| ||| Sbjct 244391 ATACCACCGCGGAGACGTAGAACCAAGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCG 244332 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| || || || || || || || | || || ||||||||||| || Sbjct 244331 GACAATGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAAATCAGGCGCTGTTGGTCTGGT 244272 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | |||||| | ||| || Sbjct 244271 GGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCGATGGTGTCCGAGGACTCC 244212 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || || |||| || || || || |||||||| Sbjct 244211 ACCTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 244162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131609388540