Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq268 114 2e-20 >seq268 Length=30626 Score = 114 bits (126), Expect = 2e-20 Identities = 386/590 (65%), Gaps = 16/590 (3%) Strand=Plus/Minus Query 113565 TGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCC 113624 |||||||||| ||| | ||| | | ||| || |||||||| || ||||| | | Sbjct 28988 TGAACTGAATAGGTGCTGAGGCAGCCATGGTTCGAAGATAGTACATTCCAGTCTTCAAGC 28929 Query 113625 CCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGA 113684 || |||||| || | |||||| || | | ||| | || || | |||| Sbjct 28928 CCAATTTCCAGCCAGCAAAATGCATGGACGTGATTTTGCCCATGGTAGGCTCCTTCATGT 28869 Query 113685 AGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCA 113744 | ||||| || || ||||||||||| || |||||||| || ||||| || | Sbjct 28868 GAATGTTCAAGCTCTGAGATTGATCGATAAACGCACCACGATCGGCGGCCATTGTGATGA 28809 Query 113745 CA-TCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 | | | || ||| ||||| || || ||||||| ||| || ||||| ||||| Sbjct 28808 TGGTACGTTGACT-GATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCATCGGGGATG 28750 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGAC 113863 | || ||||| || || |||||| | | ||| ||| |||||||| | ||| Sbjct 28749 TTGGGAATGTTTTGAATAGAACCACCCTCGGCAATGATGCGATTCTTCATATTGTCAGAC 28690 Query 113864 CAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCAC 113921 |||||||| |||| |||||||| | || ||| ||||| || || || | Sbjct 28689 CAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATG--GGTTGACGACTTGGAATTCGC 28632 Query 113922 CCGCGAGGGTGCGTC-TCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 113980 | || || |||| | || ||||| || | ||| ||||| || || ||||||||| Sbjct 28631 CAGCAAGCACACGTCGTGAG-TAGATGTTCGACGTATATGGTTCGAAACACTCATTGAAG 28573 Query 113981 CCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 114040 |||| ||||| | |||||||| || ||||| || |||| | ||| ||| |||| Sbjct 28572 CCCAGAATTTGAGATGTGGAGGCAGTTGGCATTGGGGCCACTAAAAGCGAGTTGCGGACG 28513 Query 114041 CC---CTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCT-TTGTCTC 114096 || ||||| | || ||||||| | |||||||| || || || ||| Sbjct 28512 CCGTGCTTTT---TTATATCAGCCTTGAGCGAATCCCAGTCCCAG-AGATCTGTTGGTGT 28457 Query 114097 CCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCT 114146 | | |||||| ||| | || ||||||||||| || |||| || |||| Sbjct 28456 GACGTTCCACATGTCATATTGTAGGATACCTTGCGATACTGGAGAGCCCT 28407 Score = 107 bits (118), Expect = 2e-18 Identities = 347/535 (65%), Gaps = 13/535 (2%) Strand=Plus/Minus Query 114791 TCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGA 114850 ||||||||||||||||| |||||||| ||||| | || |||| ||||| ||| || Sbjct 27716 TCAACACGCTTCATGAACAGGTCTGGAATCCACAAGGCGTAGAAAAGATCACGAGCACGC 27657 Query 114851 GCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCAC 114910 || ||||| | || || || | || ||||| ||| | ||| || || ||||| Sbjct 27656 GCCTCTTCTTTACCGTGGTTCTTTCTCAGGTCCAACCAGTTGAAGATGTCGGCATGCCAT 27597 Query 114911 GGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATAC 114964 || ||||| || | |||| || | | |||| ||| |||||| || || Sbjct 27596 GGCTCCAGATAGATTGCGA---ACGCACCAGGACGCTTGTTTCCACCCTGGTCAACGTAG 27540 Query 114965 CTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTC 115024 | || || |||| || || || ||||| |||| | |||| ||| ||| ||||| Sbjct 27539 CGAGCAGTCGCATCGAAAACACGGAGCATAGGAACTAGTCCATTGGATGTGCCGTTTGTT 27480 Query 115025 CCCCGAATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCC 115084 || | ||| || | |||||| || || | || | |||||| || || || Sbjct 27479 CCTCCAATGTATGATCCAGTGGCTCGGATGCGGTGCACGTTGAGACCAATGCCGCCAGCG 27420 Query 115085 CACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCC 115144 ||||||||| || || ||||| || ||||||| || || || ||| || Sbjct 27419 GTCTTTGAGATCATAGCACAAGTTTTGAGAGTGTCGTAGATACCCTCAATGCTGTCCTCC 27360 Query 115145 TTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGG 115204 || | | | ||| |||||| || | ||| || ||||| || || ||||| ||| Sbjct 27359 TTCATGTCAACAAGAAAGCAGGAGGAAAGTTGCGGTTGAGGTGTGCCTGCATTGAAAAGG 27300 Query 115205 GTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGG 115262 || || | || || |||| || ||| |||||| | | ||| |||| | | | | Sbjct 27299 GTAGGCGAAGCATGCGTGAA-GTA-TTTGCTGGACATGTAGTTGTAAGTCTGAATGGCAG 27242 Query 115263 CGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG 115317 | |||||| || ||||| || || | | || ||||| | ||||| ||| || Sbjct 27241 CTTCAATGTCCTCTCCGTGGATGCCAACAGCCACACGCATGATCATGTGTTGTGG 27187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597349530528600