Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq18 98.7 1e-15 >seq18 Length=328773 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || |||||||||||||| | || || | ||||| | ||||| ||| Sbjct 244586 GTCGACTCCTTCTGAATGTTGTAATCGCTCAACGTACGTCCATCTTCCAATTGCTTTCCG 244527 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| ||||| ||||| || ||||| || || || || || ||||| ||| Sbjct 244526 GCGAAGATGAGGCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCCTGGATTTTCGTCTTG 244467 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| | || ||||| | || | |||||||||||| | ||| Sbjct 244466 ACGTTGTCGATCGTATCGGAAGATTCAACTTCGAGCGTAATGGTCTTGCCGGTGAGAGTC 244407 Query 64427 TTTACGAAAATTTGCAT 64443 || |||||||||||||| Sbjct 244406 TTGACGAAAATTTGCAT 244390 Score = 91.5 bits (100), Expect = 1e-13 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || |||||||| || | || ||| || |||| || ||||| |||||| Sbjct 244130 GTGGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCGTCCTCGAGCTGTTTGCCG 244071 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || | ||||||||||| || || |||||||| || ||||| || || ||| Sbjct 244070 GCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTTGGTCTTC 244011 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCA 64421 ||| || | || || | || || || || | || | ||||||||| |||| Sbjct 244010 ACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCA 243956 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 64246 CGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCC 64305 ||| || || || || |||||||| || | | ||||| |||| || ||||||||||| Sbjct 244359 CGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACCGTCCTCGAGCTGCTTGCC 244300 Query 64306 GGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTT 64365 |||| |||| || ||||| ||||| || || || || || || || || || || ||| Sbjct 244299 GGCAAAAATCAGGCGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT 244240 Query 64366 TACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | || || || ||||| || | || | |||||| || ||||| || Sbjct 244239 GACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTAATGGTCTTACCCGTCAAGGT 244180 Query 64426 TTTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 244179 CTTCACGAAGATCTGCAT 244162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499641396169800