Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq268 138 1e-27 >seq268 Length=30626 Score = 138 bits (152), Expect = 1e-27 Identities = 438/672 (65%), Gaps = 8/672 (1%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || || ||| |||||||| || || ||| Sbjct 27112 AACTACCAATACTTTGGCTTCAAGACGCTTGAGCGATCGTACCTACTGCGAATAAGCGGC 27171 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | ||| | ||||| || || || || | ||||| || || | || || ||||| | Sbjct 27172 AAGGTCGCTGAGCGTCCACAACACATGATCATGCGTGTGGCTGTTGGCATCCACGGAGAG 27231 Query 93835 GACATGCCGAA--TGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATAC-CATG 93891 ||||| ||| || | | | ||| || ||||| ||| | || |||| Sbjct 27232 GACATT--GAAGCTGCCATTCAGACTTACAACTACATGTCCAGCAAATACTTCACGCATG 27289 Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTG-TTTCCT 93950 | | || ||||| ||||| || || || || || || | || || || |||| | Sbjct 27290 -CTTCGCCTACCCTTTTCAATGCAGGCACACCTCAACCGCAACTTTCCTCCTGCTTTCTT 27348 Query 93951 GATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGAC 94010 | |||| | |||| ||| ||| || || | ||||| ||||| ||||| | Sbjct 27349 GTTGAC-ATGAAGGAGGACAGCATTGAGGGTATCTACGACACTCTCAAAACTTGTGCTAT 27407 Query 94011 CATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTC 94070 |||||||| ||| || || || || ||| || ||| | | || |||| || || Sbjct 27408 GATCTCAAAGACCGCTGGCGGCATTGGTCTCAACGTGCACCGCATCCGAGCCACTGGATC 27467 Query 94071 CTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAA 94130 ||||| | || || || ||||| ||||| || || || ||||||||||| || ||| | Sbjct 27468 ATACATTGGAGGAACAAACGGCACATCCAATGGACTAGTTCCTATGCTCCGTGTTTTCGA 27527 Query 94131 CAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTA 94190 | || |||||||| ||||||||||| | | | ||| | ||||| |||| Sbjct 27528 TGCGACTGCTCGCTACGTTGACCAGGGTGGAAACAAGCGTCCTGGTGCGTTCGCAATCTA 27587 Query 94191 TCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAA 94250 ||| ||||| ||||| || ||| | | | |||||| ||||||||||||| || Sbjct 27588 TCTGGAGCCATGGCATGCCGACATCTTCAACTGGTTGGACCTGAGAAAGAACCACGGTAA 27647 Query 94251 CGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 || || | | || | || || |||||||| | ||| | |||||||| || ||||| Sbjct 27648 AGAAGAGGCGCGTGCTCGTGATCTTTTCTACGCCTTGTGGATTCCAGACCTGTTCATGAA 27707 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || || || | ||| ||| |||| || | || || | || || || || || | Sbjct 27708 GCGTGTTGAACAGAACGCCGAATGGACGCTGATGTGCCCTCACGAGTGCCCTGGCCTTGC 27767 Query 94371 CGACGTTTGTGG 94382 ||| || | ||| Sbjct 27768 CGAAGTATATGG 27779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494719829698200