Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq18 104 2e-17 >seq18 Length=328773 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || || | ||| || || || || |||||||||||||| | | | | ||||| Sbjct 244598 ACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGCTCAACGTACGTCCATCTTCC 244539 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 ||||| || || ||| | || | ||||||||||| |||||| || |||||||| Sbjct 244538 AATTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCCTGG 244479 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 ||||| | || || | || || |||||| | ||| || || | |||||||| || Sbjct 244478 ATTTTCGTCTTGACGTTGTCGATCGTATCGGAAGATTCAACTTCGAGCGTAATGGTCTTG 244419 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || || |||||||||||| Sbjct 244418 CCGGTGAGAGTCTTGACGAAAATTTGCATA 244389 Score = 93.3 bits (102), Expect = 3e-14 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || || || || || || |||||||| || ||| ||| |||| || | ||| Sbjct 244136 TGGAGTGTGGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCGTCCTCGAGCTGT 244077 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | ||||||||||| ||||| ||| |||||||||||||| ||| ||| Sbjct 244076 TTGCCGGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTTG 244017 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 | || ||| | || || || ||||| || || || | ||| ||||| || || ||| Sbjct 244016 GTCTTCACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTC 243957 Query 15154 A 15154 | Sbjct 243956 A 243956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357389626135325