Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq18 122 8e-23 >seq18 Length=328773 Score = 122 bits (134), Expect = 8e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || ||||| || ||||| |||||||||| || ||| || ||| || Sbjct 244599 CACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGCTCAACGTACGTCCATCTTC 244540 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 | || ||||| ||| |||| | ||||| || || || || || |||||||||||| Sbjct 244539 CAATTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCCTG 244480 Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||||||| ||||| |||| |||| || || | | || ||||||| || | || | Sbjct 244479 GATTTTCGTCTTGACGTTG-TCGATCGTATCGGAAGATTCAACTTCGAGCGTAATGGTCT 244421 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||||| ||||| || || ||||| ||||| Sbjct 244420 TGCCGGTGAGAGTCTTGACGAAAATTTGCAT 244390 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | ||||| || | ||| ||||| || || || ||||| ||| | Sbjct 244388 CCACCGCGGAGACGTAGAACCAAGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 244329 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || || | |||| ||||| || || || || Sbjct 244328 AATGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAAAATCAGGCGCTGTTGGTCTGGTGGG 244269 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| || ||||| |||| |||| |||||||| ||| || Sbjct 244268 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TCGATGGTGTCCGAGGACTCCAC 244210 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || |||| || || || || |||||||| Sbjct 244209 CTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTCACGAAGATCTGCAT 244162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497560650800