Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq18 109 5e-19 >seq18 Length=328773 Score = 109 bits (120), Expect = 5e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 |||| || || ||||| || || || |||||||| | || ||| |||||||| Sbjct 244592 TGCAAGGTCGACTCCTTCTGAATGTTGTAATCGCTCAACGTACGTCCATCTTCCAATTGC 244533 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| ||| | || | || || ||||| || ||||| || || || || || ||||| Sbjct 244532 TTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCCTGGATTTTC 244473 Query 45258 TGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316 |||| || | || | || |||||||| || |||||||| |||| || |||||||| Sbjct 244472 GTCTTGA-CGTTGTCGATCGTATCGGAAGATTCAACTTCGAGCGTAATGGTCTTGCCGGT 244414 Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || ||||||||||| Sbjct 244413 GAGAGTCTTGACGAAAATTTGCAT 244390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000120728200