Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq268 98.7 2e-15 >seq268 Length=30626 Score = 98.7 bits (108), Expect = 2e-15 Identities = 441/685 (64%), Gaps = 13/685 (2%) Strand=Plus/Minus Query 203838 TCTTG-TCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895 ||||| || || ||||||||||| || | | | ||||| | || ||| ||||||||||| Sbjct 29001 TCTTGGTCAACAGTGAACTGAATAGGTGCTGA-GGCAGCCATGGTTCGAAGATAGTACAT 28943 Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955 || ||||| | |||| | ||| || | |||||||| | | ||||| || | | Sbjct 28942 TCCAGTCTTCAAGCCCAATTTCCAGCCAGCAAAATGCATGGACGTGATTTTGCCCATGGT 28883 Query 203956 GGGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTG 204014 || || |||||||||||||| ||| ||| ||||| ||| || || ||||| | Sbjct 28882 AGGCTCCTTCATGTGAATGTTCAAGCTCTGAGATTGATCGAT-AAACGCACCACGATCGG 28824 Query 204015 CGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGG 204074 ||||||| |||| ||||| || |||||||| || |||||| | | | || Sbjct 28823 CGGCCATTGTGATGATGGTACGTTGACTGATCTCCCAGACGGTCTTGTAGAGAGCCTTGA 28764 Query 204075 TGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 ||| | || | | | | || || || || || ||||| || | | || Sbjct 28763 TGTCATCGGGGATGT-TGGGAATGTTTTGAATAGAACCACCCTCGGCAATGATGCGATTC 28705 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | || ||| | |||| | || || ||| | || ||||||| | Sbjct 28704 TTCATATTGTCAGACCAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGGGTTGACG 28645 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | || || || || | ||||| | ||| | | | | ||| || |||||||||| Sbjct 28644 ACTTGGAATTCGCCAGCAAGCACACGTCGTGAGTAGATGTTCGACGTATATGGTTCGAAA 28585 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 ||| ||| ||| | ||| |||| ||| ||| || ||||| || |||| | || Sbjct 28584 CACTCATTGAAGCCCAGAATTTGAGATGTGGAGGCAGTTGGCATTGGGGCCACTAAAAGC 28525 Query 204314 GAGTTGCGCACACCGT-ATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGC 204372 |||||||| || |||| ||||| | || ||| || || |||||| || | Sbjct 28524 GAGTTGCGGACGCCGTGCTTTTTTATATCAGC-CTTGAGCGAATCCCAGTC--CCAGAGA 28468 Query 204373 ACTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCC 204430 ||| ||| | ||| ||||||||| | || | ||| ||||| ||||| |||| Sbjct 28467 TCTGTTGGTGTGACGTTCCACATGTCATATTGTAGGATACCTTGCGATACTGGAGAGCCC 28408 Query 204431 TTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGA 204490 ||||| | | || | || |||| ||| || ||||| || | || || ||| Sbjct 28407 TTGTAGGATTGGTACGTACCCTCTTCTTGTGCAAGTTTGCAGGAAGAGGTCAAGGCAGCG 28348 Query 204491 TAGTACATGGTCTCAAAGATCTGAA 204515 | ||| ||||| || ||||| |||| Sbjct 28347 TGGTAAATGGTTTCGAAGATTTGAA 28323 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 205165 CTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTC 205224 || ||| |||||||| ||||||| | |||| || |||||||| || | | || Sbjct 27708 CTTCATGAACAGGTCTGGAATCCACAAGGCGTAGAAAAGATCACGAGCACGCGCCTCTTC 27649 Query 205225 GTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTA 205283 | || |||||||| ||| ||||| ||| | | | |||||||| ||||| ||||| | Sbjct 27648 TTTACCGTGGTTCTTTCTCAGGTCCAACCA-GTTGAAGATGTCGGCATGCCATGGCTCCA 27590 Query 205284 ACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCG 205343 | | || | || || || | |||||| ||||||||||| || ||||| ||| Sbjct 27589 GATAGATTGCGAACGCACCAGGACGCTTGTTTCCACCCTGGTCAACGTAGCGAGCAGTCG 27530 Query 205344 CGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGT 205392 | | |||||| || ||||| || || || || |||| || ||||| || Sbjct 27529 CATCGAAAACACGGAGCATAGGAACTAGTCCATTGGATGTGCCGTTTGT 27481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795149783005200