Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq18 138 1e-27 seq16 107 2e-18 >seq18 Length=328773 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| | ||||| |||| ||||||||||||||||| || Sbjct 244353 CTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACCGTCCTCGAGCTGCTTGCCGGCAAA 244294 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||| ||||| | || | || |||||||||| |||||| |||||| ||| Sbjct 244293 AATCAGGCGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGT 244235 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| || ||||| |||| || ||||| || ||||||| || || | Sbjct 244234 TGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTAATGGTCTTACCCGTCAAGGTCTTCA 244175 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 244174 CGAAGATCTGCAT 244162 Score = 107 bits (118), Expect = 2e-18 Identities = 125/169 (74%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| || || || || |||| |||||||| ||||||||||| Sbjct 244124 TCCTTCTGGATGTTGTAGTCCGAGAGGGTTCGGCCGTCCTCGAGCTGTTTGCCGGCGAAG 244065 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| ||||||||||| | || | | |||||||| ||||| |||| | | Sbjct 244064 ATCAAACGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATCTTGGTCTTCACATTG 244005 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571 | | |||||||| || || || || | |||||||| ||||| |||| Sbjct 244004 TCGATGGTGTCGCTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCA 243956 >seq16 Length=359911 Score = 107 bits (118), Expect = 2e-18 Identities = 83/99 (84%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||||||||||||||| |||| ||||||||||| || ||||| Sbjct 61117 CTCCTTTTGGATGTTGTAGTCGGATAGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCGAA 61176 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||||||| |||||||| | || | | |||||||| Sbjct 61177 GATCAAGCGTTGCTGGTCTGGAGGAATCCCTTCCTTGTC 61215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234549313400