Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq171 122 9e-23 seq18 122 9e-23 >seq171 Length=70297 Score = 122 bits (134), Expect = 9e-23 Identities = 196/281 (70%), Gaps = 3/281 (1%) Strand=Plus/Plus Query 133171 GTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCG 133230 || |||||||| || || | || ||||| | |||||||||||||| || || ||| Sbjct 55051 GTCTCGATGAGAAGGGAGTATGTCTCGGAGTGAATATTCTCCATGGCGATCTGGAAACCG 55110 Query 133231 TAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCG 133290 || ||||| || || || ||||| ||||| | ||| ||||||| || || || Sbjct 55111 TAGAAGCATCGAGCTTCTGGAACCTGGACTTCATTGCTGAATCGCTCGAGAAGGTTCTCA 55170 Query 133291 TTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCG 133350 ||||| |||||||| || ||||| || || || | ||| |||||| ||| ||| Sbjct 55171 TTGACAATGCCGTCCGATGCTGCGAAGAATGCGAGGATGTGGGAGATGAAGAAGCGTTCG 55230 Query 133351 TTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACG 133407 | |||||| | ||| | |||||| | || ||||| || || | ||| ||| | Sbjct 55231 TCGTCGTTGAGGCGGTTGTTCCAGTCTGGAACATCTTTGGAGAGATCAATCTCTTCGGCA 55290 Query 133408 GTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACAT 133448 ||||| || || ||| ||| || |||||||||| ||| || Sbjct 55291 GTCCAGAATGAGGCCATGGCCTTCTTGTACATACGCCAGAT 55331 Score = 111 bits (122), Expect = 2e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||||||| |||| |||||||| | || ||||| |||||| || |||||| Sbjct 54725 CAGGCAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATGAGCTCGTTGGAAAAGGTCAAG 54784 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 ||||||||||| || ||||| |||||||| || |||| |||||| || || ||| Sbjct 54785 CCGGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGCACCACTGAAAAAG 54844 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGT 133058 | ||| ||||| || ||||| || || |||||| ||||||| Sbjct 54845 ATGCCTTCGACAGCGGCGAATGCGACTAGGCGCGACGCGAACGT 54888 >seq18 Length=328773 Score = 122 bits (134), Expect = 9e-23 Identities = 160/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | ||||| || ||||| ||| | || || ||| || | Sbjct 244162 ATGCAGATCTTCGTGAAGACCTTGACGGGTAAGACCATTACCTTGGAGGTGGAGTCCTCG 244221 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || |||| ||||| ||||| || || | |||| Sbjct 244222 GACACCATCGACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCACCAGACC 244279 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| || |||| || ||||| ||||| || |||| ||||| | |||||||| Sbjct 244280 AACAGCGCCTGATTTTTGCCGGCAAGCAGCTCGAGGACGGTCGCACATTGTCCGACTACA 244339 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| ||||| | |||||||| ||||| || ||| Sbjct 244340 ACATCCAGAAGGAGTCCACGCTGCACTTGGTTCTACGT 244377 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||| ||||| || |||| || || | || Sbjct 244390 ATGCAAATTTTCGTCAAGACTCTCACCGGCAAGACCATTACGCTCGAAGTTGAATCTTCC 244449 Query 38304 GACAGCGTGCAAACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | || | | | | |||| ||||||| ||||| ||||| ||||| | ||||| Sbjct 244450 GATA-CGATCGACAACGTCAAGACGAAAATCCAGGACAAGGAGGGTATTCCACCAGACCA 244508 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| || || || |||| || | || || | | ||| ||||| Sbjct 244509 ACAGCGCCTCATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACGTTGAGCGATTACAA 244568 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||| || ||||| |||| |||| |||||||| ||| | | |||||| Sbjct 244569 CATTCAGAAGGAGTCGACCTTGCACTTGGTGCTCCGTCTTCGTGGCGGC 244617 Score = 100 bits (110), Expect = 3e-16 Identities = 133/181 (73%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| |||| || ||| ||| ||||| | | | || | | |||| Sbjct 243958 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCAGCGACACCATCGACAATG--TGAAGA 244015 Query 38327 AAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCA 38385 || || | ||||| || ||||| || | ||||| ||||| | || | ||| |||| Sbjct 244016 CCAAGATTCAAGACAAGGAAGGAATCCCACCGGACCAGCAGCGTTTGATCTTCGCCGGCA 244075 Query 38386 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGC 38445 ||||||| || |||| || |||||| |||||||||||||| |||||| | || || | Sbjct 244076 AACAGCTCGAGGACGGCCGAACCCTCTCGGACTACAACATCCAGAAGGAATCCACACTCC 244135 Query 38446 A 38446 | Sbjct 244136 A 244136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169392572800