Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq268 131 2e-25 seq171 118 1e-21 seq17 107 2e-18 >seq268 Length=30626 Score = 131 bits (144), Expect = 2e-25 Identities = 351/534 (66%), Gaps = 11/534 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| ||||| ||||||| || || | || ||||| || || || ||||| ||| Sbjct 27187 CCACAACACATGATCATGCGTGTGGCTGTTGGCATCCACGGAGAGGACATTGAAGCTGCC 27246 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | |||| ||| || | |||||| | |||| || || | || ||||| ||| Sbjct 27247 ATTCAGACTTACAACTACATGTCCAGCAAATACTTCACGCATGCTTCGCCTACCCTTTTC 27306 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || || || ||||| ||| ||| | ||| || || ||| ||| | |||||||| Sbjct 27307 AATGCAGGCACACCTCAACCGCAACTTTCCTCCTGCTTTCTTGTTGACATGAAGGAGGAC 27366 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || || |||| |||||||| ||||| ||||||||| ||||| Sbjct 27367 AGCATTGAGGGTATCTACGACACTCTCAAAACTTGTGCTATGATCTCAAAGACCGCTGGC 27426 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911 || || || | || | || || |||||| || ||| |||| ||||| Sbjct 27427 GGCATTGGTCTCAACGTGCACCGCATCCGAGCCACTGGATCATACATTGGAGGAACAAAC 27486 Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971 || ||| |||| | |||| ||||| || || || | || || || ||||| || Sbjct 27487 GGCACATCCAATGGACTAGTTCCTATGCTCCGTGTTTTCGATGCGACTGCTCGCTACGTT 27546 Query 111972 AACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025 |||| | ||| ||||| || | ||||| ||||||| ||||||||||| Sbjct 27547 GACCAGGGTGGAAACAAGCGTCCT---GGTGCGTTCGCAATCTATCTGGAGCCATGGCAT 27603 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085 || || ||| | | | | || || | ||||| ||| | || |||||||| ||| Sbjct 27604 GCCGACATCTTCAACTGGTTGGACCTGAGAAAGAACCACGGTAAAGAAGAGGCGCG-TGC 27662 Query 112086 -CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 || ||||| |||| ||| | ||||||||||| || ||||||||| | ||||| Sbjct 27663 TCGTGATCTTTTCTACGCCTTGTGGATTCCAGACCTGTTCATGAAGCGTGTTGA 27716 Score = 123 bits (136), Expect = 3e-23 Identities = 313/464 (67%), Gaps = 14/464 (3%) Strand=Plus/Plus Query 112783 AGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGC 112842 |||| ||||||| || ||||| | || |||| ||| |||||| || || | ||||| Sbjct 28407 AGGGCTCTCCAGTATCGCAAGGTATCCTACAATATGACATGTGG-AACGTCACACCAACA 28465 Query 112843 T-TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 112901 || || |||||||| | ||||||| || || || | || | || ||| Sbjct 28466 GATCTCTGGGACTGGGATTCGCTCAAGGCTGATATAAAAAAGCACGGCGTCCGCAACTCG 28525 Query 112902 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 112961 ||||| |||| ||||||||||| |||||||| | ||||| |||| ||||| || Sbjct 28526 CTTTTAGTGGCCCCAATGCCAACTGCCTCCACATCTCAAATTCTGGGCTTCAATGAGTGT 28585 Query 112962 TTTGAACCCTACACGACGAACATCTATCTGA-GAAGAACCCTCGCGGGAGAGTTTGTGAT 113020 || ||||| || ||| |||||||||| || | || | || || || || || | Sbjct 28586 TTCGAACCATATACGTCGAACATCTA-CTCACGACGTGTGCTTGCTGGCGAATTCCAAGT 28644 Query 113021 TGTCAACAAGCAT--CTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATG 113078 |||||| ||| || | | || ||| ||||| ||||||||||| | ||||| Sbjct 28645 CGTCAAC--CCATGGCTACTCAAGGATCTCGTCGAGATGGGTCTCTGGTCTGACAATATG 28702 Query 113079 AAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAA 113138 ||| ||| ||| | | ||||||||| |||||||| ||| | || || ||||| Sbjct 28703 AAGAATCGCATCATTGCCGAGGGTGGTTCTATTCAAAACATTCCCAACATCCCCGATGAC 28762 Query 113139 ATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCAT--TGAC-ATG 113195 || ||| | ||| || || ||||| |||| | || | | ||| | || ||| Sbjct 28763 ATCAAGGCTCTCTACAAGACCGTCTGGGAGATCA--GTCAACG-TACCATCATCACAATG 28819 Query 113196 GCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAA 113239 ||||| ||||||||| || || |||||| ||| || |||| Sbjct 28820 GCCGCCGATCGTGGTGCGTTTATCGATCAATCTCAGAGCTTGAA 28863 >seq171 Length=70297 Score = 118 bits (130), Expect = 1e-21 Identities = 332/502 (66%), Gaps = 12/502 (2%) Strand=Plus/Minus Query 102109 CAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGT 102165 |||| || || |||| ||||| || || ||||| |||||||| | ||| || | Sbjct 54950 CAGTCCCCTGCATTCGCAAGAAGGCTGACTGGGCATTGAAGTGGATCTGCGATGACAATT 54891 Query 102166 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 | | | || || ||| || ||||||| || ||| || || ||||| ||| || Sbjct 54890 C---TACGTTCGCGTCGCGCCTAGTCGCATTCGCCGCTGTCGAAGGCATCTTTTTCAGTG 54834 Query 102226 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 102285 || | ||| | |||| ||||||||||| || ||||||||||| || | ||| | Sbjct 54833 GTGCTTTCGCATCCATTTTCTGGCTCAAGAAACGTGGTCTCATGCCCGGCTTGACCTTTT 54774 Query 102286 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTCA 102345 |||||||||| |||||||| ||||||||| | ||| || ||||| |||||| Sbjct 54773 CCAACGAGCTCATCTCTCGCGACGAGGGAATGCACACCGACTTTGCCTGTCTCCTTTTCT 54714 Query 102346 AATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTTG 102405 | | | | || || | |||| || | | | || | | ||| || ||| Sbjct 54713 CACAACTCAACAAGAAGCCTGCTCCTGAAGCTGTCCGCGCCATCATCACGGAGGCAGTTC 54654 Query 102406 AGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCTG 102465 | |||||| | | |||| | || || || |||||| || |||| |||||||| | Sbjct 54653 AAATTGAGCAAGAATTCTTGAGCGAGGCACTACCATGCAGACTGCTCGGCATGAATTCAG 54594 Query 102466 AAAAGATGTCCGAATATATTGAGTATGTATCTGATAGATTGTTG-AAGCAGATCGG-GGT 102523 |||| | |||| ||||||| ||| ||||| | | ||| ||| |||| | Sbjct 54593 GGCTCATGTGCCAATACATTGAGTTTGTCGCTGATCGTCTCTTGCTTGCA-CTCGGCAAT 54535 Query 102524 GCCTCCA-ATTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGACG 102582 | || | | | || | |||||| || ||||||||||||||||| |||| || Sbjct 54534 G--TCAAGGTCTATAATGCTGTGAATCCCTTCGACTTCATGGAGAACATCTCTCTCGCCG 54477 Query 102583 GGAAGACAAACTTCTTCGAAAA 102604 | |||||||| |||||||| || Sbjct 54476 GAAAGACAAATTTCTTCGAGAA 54455 >seq17 Length=345208 Score = 107 bits (118), Expect = 2e-18 Identities = 352/531 (66%), Gaps = 21/531 (4%) Strand=Plus/Minus Query 15848 GCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCTGGGCGAAG 15907 |||||| ||||| || |||| || | || || || ||||| || || || || Sbjct 152034 GCGTCCACGAACGTCCGGTAGAGGGACGTTGACGTTGCGGTCAAAACGGCCAGGTCGGGT 151975 Query 15908 GAGCGCGTCATCAAG-GATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTT 15966 ||||||| ||| || ||| || | ||| || || || |||| | ||| || || Sbjct 151974 GAGCGCGCTATCGAGAGAT-TCGGGGAAATTGGTGGCTGCAATGATGATAATGCCGCTTC 151916 Query 15967 CGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCAT 16026 | | ||||| || || | || ||||| || ||||| | |||||| | | ||| Sbjct 151915 CTTGGTCAAATCCGTCGAGTTCGGTCAAGAGTTGGTTGAGAGTTTGCTTCG------CAT 151862 Query 16027 TCGCTGGCATACCACCAGCACTGCG-TTGCTTTCCCACGGCATCAATCTCATCAATGAAG 16085 || | ||| | | | | | || |||| | || | ||||| | ||| || |||||| Sbjct 151861 AAGC-GCCAT--CGCGTGGATTCCGCTTGCCT-CCTATCGCATCCAACTCGTCGATGAAG 151806 Query 16086 ACGAT-GCATGGTTGATTTT-CGCGAGCGACTTCA-AAGAGATCCCGTACACGCTTGGCG 16142 | ||| ||| || || ||| |||| || ||| ||||| ||||| |||||||| ||| Sbjct 151805 ATGATAGCAGGG--GACTTTGCGCGTGC-ACTCGTGAAGAGCTCCCGAACACGCTTCGCG 151749 Query 16143 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTA 16202 || ||||||||| |||| || | || | | |||| | || ||| || || Sbjct 151748 CCGACACCAACATACATTTCGTCGAATTCCGACCCGGACGCATAGAAGAAAGGAACGCCG 151689 Query 16203 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGG 16262 | |||||| || | ||||| || || |||||||| || ||||| ||| ||| | || Sbjct 151688 GCTTCACCGGCGACTGCTCGTGCAAGTAGAGTCTTGCCAGTACCAGGCGGACCAACAAGC 151629 Query 16263 AGGGCACCTCGTGGAATCTTGGCGCC-ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAA 16321 || |||| ||||| ||| |||| | || || | | | ||| | ||| || || Sbjct 151628 AGAACACCCTTTGGAAGCTTACCGCCCAGCGCCGAAAATTGTTT-AGGATCCTTCAGGAA 151570 Query 16322 ATCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 16372 |||| | ||||| |||||| |||||||| | || ||||||||||| Sbjct 151569 TGCCACCAGCTCTTGCAATTCTTCTTTGGCCTCATCGCAACCCTCAACATC 151519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738171192400