Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq268 165 1e-35 seq17 98.7 1e-15 >seq268 Length=30626 Score = 165 bits (182), Expect = 1e-35 Identities = 360/535 (67%), Gaps = 13/535 (2%) Strand=Plus/Minus Query 106784 TCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGA 106843 ||||| ||||||||||| |||||||||||||||| || | || ||||| | | || Sbjct 27716 TCAACACGCTTCATGAACAGGTCTGGAATCCACAAGGCGTAGAAAAGATCACGAGCACGC 27657 Query 106844 GCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCAT 106903 |||||||| | ||| ||||| || | || | | | | ||| || || |||||| Sbjct 27656 GCCTCTTCTTTACCGTGGTTCTTTCTCAGGTCCAACCAGTTGAAGATGTCGGCATGCCAT 27597 Query 106904 GGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATAG 106957 ||||| ||||||| ||||| | || ||||| ||| | || | || ||| Sbjct 27596 GGCTCCAGATAGATTGCGAACGCACC---AGGACGCTTGTTTCCACCCTGGTCAACGTAG 27540 Query 106958 CGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTC 107017 || || || || | || || || ||||| |||| | |||| ||| || ||||| Sbjct 27539 CGAGCAGTCGCATCGAAAACACGGAGCATAGGAACTAGTCCATTGGATGTGCCGTTTGTT 27480 Query 107018 CCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCC 107077 || | ||| ||| | |||||| | || | || | ||||| || ||||| Sbjct 27479 CCTCCAATGTATGATCCAGTGGCTCGGATGCGGTGCACGTTGAGACCAATGCCGCCAGCG 27420 Query 107078 CACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCC 107137 ||||||||| ||||| | ||||| | |||||||| | || ||||||| Sbjct 27419 GTCTTTGAGATCATAGCACAAGTTTTGAGAGTGTCGTAGATACCCTCAATGCTGTCCTCC 27360 Query 107138 TTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGG 107197 || || | | ||| ||||| ||| | |||||| ||||| || |||||||| ||| Sbjct 27359 TTCATGTCAACAAGAAAGCAGGAGGAAAGTTGCGGTTGAGGTGTGCCTGCATTGAAAAGG 27300 Query 107198 GTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAG 107255 || || | || || |||| || ||| |||||| | || ||| |||| | | ||| Sbjct 27299 GTAGGCGAAGCATGCGTGAA-GTA-TTTGCTGGACATGTAGTTGTAAGTCTGAATGGCAG 27242 Query 107256 AATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGGG 107310 |||||||| || ||||||||||| | ||||||||||| | ||||| ||| || Sbjct 27241 CTTCAATGTCCTCTCCGTGGATGCCAACAGCCACACGCATGATCATGTGTTGTGG 27187 Score = 132 bits (146), Expect = 6e-26 Identities = 709/1110 (64%), Gaps = 32/1110 (3%) Strand=Plus/Minus Query 105551 TCAAGACTGAACTGAATTGG-GC-GCGCCTTTGCCTTAGATCGGAGATAGTACATCCCGG 105608 |||| | |||||||||| || || | | | ||| | | ||| ||||||||||| || | Sbjct 28995 TCAACAGTGAACTGAATAGGTGCTGAGGCA--GCCATGGTTCGAAGATAGTACATTCCAG 28938 Query 105609 TCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGAC 105668 |||| | || |||||| | | |||||| || | || ||| ||| || || Sbjct 28937 TCTTCAAGCCCAATTTCCAGCCAGCAAAATGCATGGACGTGATTTTGCCCATGGTAGGCT 28878 Query 105669 TTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCA 105728 | |||| || |||| || ||| || || || || |||||| | || |||| Sbjct 28877 CCTTCATGTGAATGTTCAAGCTCTGAGATTGATCGATAAACGCACCACGATCGGCGGCCA 28818 Query 105729 TATCAATGACA-TCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCA 105787 | |||| | | | || ||| ||||| || || ||||||| |||||| ||| Sbjct 28817 TTGTGATGATGGTACGTTGACT-GATCTCCCAGACGGTCTTGTAGAGAGCCTTGATGTCA 28759 Query 105788 TCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGCCTTGACCATGAGATCCTTCATA 105847 || ||||| | | || |||||||| ||||| ||| | | ||| ||| ||||||| Sbjct 28758 TCGGGGATGTTGGGAATGTTTTGAATAGAACCACCCTCGGCAATGATGCGATTCTTCATA 28699 Query 105848 TCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGACGAG--ATGCTTGTTGACAATCA 105905 | | ||||| ||||| |||| |||||| |||| || ||| |||||| | Sbjct 28698 TTGTCAGACCAGAGACCCATCTCGACGAGATCCTTGAGTAGCCATGG--GTTGACGACTT 28641 Query 105906 CAAACTCTCCCGCGAGGGTTCTTC-TCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCAT 105964 || || || || || | || | || |||||||||| ||| || ||||| || || Sbjct 28640 GGAATTCGCCAGCAAGCACACGTCGTGAG-TAGATGTTCGACGTATATGGTTCGAAACAC 28582 Query 105965 TCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTG 106024 ||||| |||| ||||| | |||||||| ||||||||||| |||| ||||| | Sbjct 28581 TCATTGAAGCCCAGAATTTGAGATGTGGAGGCAGTTGGCATTGGGGCCACTAAAAGCGAG 28522 Query 106025 TTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAGC--T 106082 || || | || | | || || ||||||| ||||||||| || || | | Sbjct 28521 TTGCGGACGCCGTGCTTTTTTATATCAGCCTTGAGCGAATCCCAGTCCCAG-AGATCTGT 28463 Query 106083 TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAA 106142 |||| | || || |||||| ||| |||| || | ||||| || ||||| |||| Sbjct 28462 TGGTGTGACGTT-CCACATGTCATATTGTAGGATACCTTGCGATACTGGAGAGCCCTTGT 28404 Query 106143 ATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGAT 106202 | | | || | ||| | ||| || | || ||| | || || ||||| | Sbjct 28403 AGGATTGGTACGTACCCTCTTCTTGTGCAAGTTTGCAGGAAGAGGTCAAGGCAGCGTGGT 28344 Query 106203 ACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATG-----C 106257 | |||||||| ||||| || ||| | || ||| |||||| || || || | | Sbjct 28343 AAATGGTTTCGAAGATTTGAATATTGAGCTTCTTTGCTTCAGGAGACTCGAAAGGCAGAC 28284 Query 106258 GTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTG 106317 | |||| | ||| |||| || ||||| || || || | || | || | || Sbjct 28283 GAAGCGCGAGGAAA-----GCATCAGCAAGACCCTGTACGCCAACTCCGACTGGACGATG 28229 Query 106318 TCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTT 106377 || || || || ||| ||||| ||| ||||||| || | Sbjct 28228 ACGGGAGTTGCTGTTGTATGCTTCAGGAACAGGATAGTGATTGACATCAATGA-TCTTAT 28170 Query 106378 TAGATTTTTGG-TAACAATCTTTGTGATTTCATGAAGTTTTTCATAATC-AAAAGTGCGA 106435 | | || || | ||| ||| || | ||| || | || | |||| | | || Sbjct 28169 TCAAGTTGCGGATGACAGTCTGGGTAACTTCGTGCAACTTCTGGAAATCGTAGACGCCGC 28110 Query 106436 GTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCA 106495 || | | | ||| | | ||||| || || |||||||| ||||| ||||| |||| Sbjct 28109 GT-TGGACGTCAACAAAGGTCGGAAGTGCCATAGATGCCAAGTTGCATACAGCAACCTCA 28051 Query 106496 TCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAA 106555 || | | |||||| | || || || ||||| || || || ||| || |||| Sbjct 28050 TCTGGTGCAGAGTACTCAATGATCTCGGTGCACAAATTAGAGCTGCGAATGGTTCCCAGG 27991 Query 106556 TTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTC 106615 ||||| ||||| ||||| ||||| || || |||||||||||| | || | || ||| Sbjct 27990 TTCTTCTGGTTGCTCTTCCGATTGCAGGCGTCTTTGTAGAGCATGAAAGGATTGCCAGTC 27931 Query 106616 TCCGTCTGTGACTTG-AGAATTGCCTTCCA 106644 || ||||| | |||| ||||| || | ||| Sbjct 27930 TCGGTCTG-GGCTTGTAGAATGGCATACCA 27902 >seq17 Length=345208 Score = 98.7 bits (108), Expect = 1e-15 Identities = 348/530 (66%), Gaps = 19/530 (4%) Strand=Plus/Minus Query 9155 GCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACCTGGACGAAG 9214 |||||| ||||| || |||| || | || || || ||||| || || || || Sbjct 152034 GCGTCCACGAACGTCCGGTAGAGGGACGTTGACGTTGCGGTCAAAACGGCCAGGTCGGGT 151975 Query 9215 GAGCGCGTCATCAAG-GATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTT 9273 ||||||| ||| || ||| || | ||| || || || |||| | ||| || || Sbjct 151974 GAGCGCGCTATCGAGAGAT-TCGGGGAAATTGGTGGCTGCAATGATGATAATGCCGCTTC 151916 Query 9274 CATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCAT 9333 | | ||||| || || | || ||||| |||||||| | |||||| | | ||| Sbjct 151915 CTTGGTCAAATCCGTCGAGTTCGGTCAAGAGTTGGTTGAGAGTTTGCTTCG------CAT 151862 Query 9334 TCGCTGGCATACCACCAGCACTGCG-TTGCTTTCCCACGGCATCAATCTCATCAATGAAG 9392 || | ||| | | | | | || |||| | || | ||||| | ||| || |||||| Sbjct 151861 AAGC-GCCAT--CGCGTGGATTCCGCTTGCCT-CCTATCGCATCCAACTCGTCGATGAAG 151806 Query 9393 ACAATA-CATGGTTGATTTT-CGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGC 9450 | ||| || || || ||| |||| || | ||||| || ||||| | || |||| Sbjct 151805 ATGATAGCAGGG--GACTTTGCGCGTGCACTCGTGAAGAGCTCCCGAACACGCTTCGCGC 151748 Query 9451 CCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAG 9510 | ||||||||| |||| || | || | | |||| | || ||| || || | Sbjct 151747 CGACACCAACATACATTTCGTCGAATTCCGACCCGGACGCATAGAAGAAAGGAACGCCGG 151688 Query 9511 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 9570 |||||| || | ||||| || || |||||||| || ||||| ||| ||| | || | Sbjct 151687 CTTCACCGGCGACTGCTCGTGCAAGTAGAGTCTTGCCAGTACCAGGCGGACCAACAAGCA 151628 Query 9571 GGGCACCCCGTGGAATCTTGGCGCC-ACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAA 9629 | ||||| ||||| ||| |||| | || || | | | ||| | ||| || || Sbjct 151627 GAACACCCTTTGGAAGCTTACCGCCCAGCGCCGAAAATTGTTT-AGGATCCTTCAGGAAT 151569 Query 9630 TCCACAATCTCTTCCAATTCATCTTTGGCGGCGTCAATCCCCTCAACATC 9679 |||| | ||||| |||||| |||||||| | || ||||||||||| Sbjct 151568 GCCACCAGCTCTTGCAATTCTTCTTTGGCCTCATCGCAACCCTCAACATC 151519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589976780755800