Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq81 107 2e-18 >seq81 Length=148755 Score = 107 bits (118), Expect = 2e-18 Identities = 188/274 (69%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 158426 TTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTG 158485 ||||| | |||| | ||| | ||||| | || | |||| || |||||||| || | Sbjct 145965 TTGCTTTTGGTAATGCGCAGCGATTTGGCGTACCATTCGGATTTGGTGGTCCTCACGCAG 145906 Query 158486 CATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGT 158545 | ||||| ||||| | |||||| ||||| | ||||| ||||| | | | ||| || Sbjct 145905 CCTTCTTCGCAACGAGCGACAAGCATAAGCGTAAGATCCCTGGTCGTCTGATTGGTTTGT 145846 Query 158546 CAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATA 158605 | || || || || ||| || | || || ||||| |||||||||| | Sbjct 145845 CTAAGGACAGGCTTGGAAACCCTGCAGCAAGGCTGGCTCTCCAGACACGAGAGCAGCACA 145786 Query 158606 TCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGT 158665 | || |||| || || |||||||||||||| || || |||||||| |||| |||||| Sbjct 145785 TTCGACGAGAGAAGGCGACCAGTAACATCTGTACTGCCCAAGCACTTTTGGCCAATATGA 145726 Query 158666 CTGGGTTCTATGCAGCATATCATGGTGCAGATGG 158699 | |||||| |||| || || || |||| || Sbjct 145725 GCGCGTTCTACGCAGTCTACCACGGACCAGAGGG 145692 Score = 89.7 bits (98), Expect = 6e-13 Identities = 178/259 (69%), Gaps = 6/259 (2%) Strand=Plus/Minus Query 159546 TATTATGATTACATATCCATCTACACAT--GGTGTATTTGAAACAAACATCA-GACAGAT 159602 ||| ||||| ||||| || | ||| | ||||| || || || | ||| || || | Sbjct 144791 TATCATGATCACATACCC--CAGCACGTTCGGTGTCTTCGAGCCACAAGTCAAGAAAGCT 144734 Query 159603 ATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGC 159662 || || | ||||| | ||||||||||||| ||| | || ||||| || | || || Sbjct 144733 -TGCGAGCTCGTTCACCAATATGGTGGTCAGGTGTATATGGACGGTGCGAACATGAACGC 144675 Query 159663 ACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACA 159722 || | ||||| || |||| ||| || || || || ||||| ||||| || Sbjct 144674 TCAAATCGGTCTTTGCTCGCCCGGTGAGATTGGAGCCGACGTCTGCCATCTGAACTTGCA 144615 Query 159723 TAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGC 159782 ||||| ||||| ||||| |||||||| ||||| || || || || || || || || Sbjct 144614 CAAGACTTTCTGCATTCCCCATGGAGGCGGAGGCCCAGGTGTTGGCCCGATCGGCGTGAA 144555 Query 159783 AAAACATCTCACACCATTT 159801 | | |||||| |||| ||| Sbjct 144554 AGAGCATCTCGCACCTTTT 144536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588047193901200