Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq13 96.9 3e-15 seq18 84.2 2e-11 >seq13 Length=375566 Score = 96.9 bits (106), Expect = 3e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 101275 AGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGC 101334 |||| | || || || ||||| ||| | ||| | |||| || |||||||| || || Sbjct 315038 AGATACCTTCTGGATGTTGTAGTCGCTCAAAGTGCGTCCATCCTCTAATTGCTTCCCGGC 314979 Query 101335 AAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTAC 101394 || ||||| ||||||||||| || ||||| |||||||| ||||| || || ||| || Sbjct 314978 GAAGATCAACCGCTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGTATCTTGGTTTTGAC 314919 Query 101395 AATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTT 101454 | | || | ||||| || | || || |||||||| | || || || |||| || || Sbjct 314918 ATTATCGATGGTGTCTGAGGACTCAACCTCAAGAGTTATGGTCTTTCCCGTTAGGGTCTT 314859 Query 101455 TACAAA 101460 || || Sbjct 314858 GACGAA 314853 >seq18 Length=328773 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || || | ||| || || || || || ||||||||| | || | |||| ||| Sbjct 244598 ACCAAGTGCAAGGTCGACTCCTTCTGAATGTTGTAATCGCTCAACGTACGTCCATCTTCC 244539 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||||||| || || || || | |||||||| || || ||||| || || || || || Sbjct 244538 AATTGCTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGTGGAATACCCTCCTTGTCCTGG 244479 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || || | || | || || || | ||| ||||| || || | || ||| Sbjct 244478 ATTTTCGTCTTGACGTTGTCGATCGTATCGGAAGATTCAACTTCGAGCGTAATGGTCTTG 244419 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | ||| || || || || ||||| Sbjct 244418 CCGGTGAGAGTCTTGACGAAAATTTGCAT 244390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396275767844565