Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq18 107 1e-18 >seq18 Length=328773 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || |||||| ||| || || || ||||| || || | | ||| |||| || Sbjct 244370 ACCAAGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTGCGACCGTCCTCG 244311 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| |||||||| ||||| |||||||| || | || | |||||||||||| Sbjct 244310 AGCTGCTTGCCGGCAAAAATCAGGCGCTGTTGGTCTGGTGGGATGCCCTCCTTGTCCTGG 244251 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || || | | | || || | ||||||||||| ||||| || || Sbjct 244250 ATCTTGGTCTTGACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAAGGTAATGGTCTTA 244191 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||||||| || || || || |||||||| Sbjct 244190 CCCGTCAAGGTCTTCACGAAGATCTGCAT 244162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935069741035