Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq171 113 8e-20 >seq171 Length=70297 Score = 113 bits (124), Expect = 8e-20 Identities = 182/260 (70%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | |||||| || ||||||||||| ||||||||| | || || | Sbjct 55073 TCTCGGAGTGAATATTCTCCATGGCGATCTGGAAACCGTAGAAGCATCGAGCTTCTGGAA 55132 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||| ||||| || ||||| ||| || || ||||||||||| || || || || || | Sbjct 55133 CCTGGACTTCATTGCTGAATCGCTCGAGAAGGTTCTCATTGACAATGCCGTCCGATGCTG 55192 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTC 48604 | ||||| || |||| || | ||| ||| |||| || | |||| || ||| Sbjct 55193 CGAAGAATGCGAGGATGTGGGAGATGAAGAAGCGTTCGTCGTCGTTGAG-GCGGTTGTTC 55251 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | | || |||||| || || | ||||| |||||||||| || || | || Sbjct 55252 CAGTCTGGAACATCTTTGGAGAGATCAATCTCTTCGGCAGTCCAGAATGAGGCCATGGCC 55311 Query 48665 TTTTTGTACATGCCCCATAT 48684 || |||||||| | ||| || Sbjct 55312 TTCTTGTACATACGCCAGAT 55331 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||||| || ||||| || ||||||| ||||||| ||| | Sbjct 54725 CAGGCAAAGTCGGTGTGCATTCCCTCGTCGCGAGAGATGAGCTCGTTGGAAAAGGTCAAG 54784 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 || ||||||| || | | |||||||||||||| | ||||||| ||| ||| ||| Sbjct 54785 CCGGGCATGAGACCACGTTTCTTGAGCCAGAAAATGGATGCGAAAGCACCACTGAAAAAG 54844 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 ||||| || || || ||||| ||| || | | |||| | || || | || || Sbjct 54845 ATGCCTTCGACAGCGGCGAATGCGACTAGGCGCGACGCGAACGTAGAATTGTCATCGCAG 54904 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 ||||| | |||||||| |||||||| Sbjct 54905 ATCCACTTCAATGCCCAGTCAGCCTTCTT 54933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526453932800