Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Venturia_20effusa_20[genbank_20GCA_5F001901625.1_202016-12-12] 545 sequences; 40,550,085 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq171 113 8e-20 seq268 107 4e-18 >seq171 Length=70297 Score = 113 bits (124), Expect = 8e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| ||||||||||| | | | ||||||| | ||| || || || || Sbjct 54921 TGGGCATTGAAGTGGATCTGCGATGACAATTCTACGTTCGCGTCGCGCCTAGTCGCATTC 54862 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 || ||||| || |||||||||||||| ||| | || || |||| |||||||||||| | Sbjct 54861 GCCGCTGTCGAAGGCATCTTTTTCAGTGGTGCTTTCGCATCCATTTTCTGGCTCAAGAA- 54803 Query 25954 AAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCT 26012 | | || | ||||||||| || ||||||||||||||||||| | |||||||| | Sbjct 54802 ACGTGGTCTCATGCCCGGCTTGACCTTTTCCAACGAGCTCATCTCTCGCGACGAGGGAAT 54743 Query 26013 CCACAGAGATTTTGCCTGCCTGCT 26036 |||| || |||||||| || || Sbjct 54742 GCACACCGACTTTGCCTGTCTCCT 54719 >seq268 Length=30626 Score = 107 bits (118), Expect = 4e-18 Identities = 291/442 (66%), Gaps = 10/442 (2%) Strand=Plus/Minus Query 221975 TCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACC 222034 ||| | ||||| || ||| | || |||||||| |||| | ||| | || || Sbjct 27770 TCGGCAAGGCCAGGGCACTCGTGAGGGCACATCAGCGTCCATTCGGCGTTCTGTTCAACA 27711 Query 222035 CTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCC 222094 | || |||||| ||||| || ||||||| || | || ||||| | | ||| ||| Sbjct 27710 CGCTTCATGAACAGGTCTGGAATCCACAAGGCGTAGAAAAGATCACGAGCACGCGCCTCT 27651 Query 222095 TCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCC 222154 || |||| ||| || ||||| ||||| | | || ||||| || ||||| |||||| Sbjct 27650 TCTTTACCGTGGTTCTTTCTCAGGTCCAACCAGTTGAAGATGTCGGCATGCCATGGCTCC 27591 Query 222155 AGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGA 222214 ||||||| || | || || || |||||||| |||||||| || || | | Sbjct 27590 AGATAGATTGCGAACGCACCAGGACGCTTGTTTCCACCCTGGTCAACGTAGCGAGCAGTC 27531 Query 222215 GCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATG 222274 || | ||| | || || | || || ||||| |||||| ||||| || || |||| Sbjct 27530 GCATCGAAAACACGGAGCATAGGAACTAGTCCATTGGATGTGCCGTTTGTTCCTCCAATG 27471 Query 222275 TACGCACCGCCGGCCCTCAGGTTACTG-GCA----GACATGCCGATACCACCGGCGTGTT 222329 || | || ||| | || | | | ||| || | || || || || ||| | Sbjct 27470 TATGATCCAGTGGCTC---GGATGCGGTGCACGTTGAGA--CCAATGCCGCCAGCGGTCT 27416 Query 222330 TCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGA 222389 | |||||||| || || | ||||||||||| ||| ||||| || ||||||||| | Sbjct 27415 TTGAGATCATAGCACAAGTTTTGAGAGTGTCGTAGATACCCTCAATGCTGTCCTCCTTCA 27356 Query 222390 CGTTCAGCAGAAAACAAGACGA 222411 || | ||||| || || || Sbjct 27355 TGTCAACAAGAAAGCAGGAGGA 27334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928838472244800